Query: NC_008463:3394000 Pseudomonas aeruginosa UCBPP-PA14, complete genome
Start: 3394000, End: 3416100, Length: 22101
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_011770:3626000 | 3626000 | 3649134 | 23135 | Pseudomonas aeruginosa LESB58, complete genome | 0 | 40850 | BLASTN svg | BLASTP svg |
NC_002516:2222896 | 2222896 | 2241599 | 18704 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 32430 | BLASTN svg | BLASTP svg |
NC_021150:4929670 | 4929670 | 4972701 | 43032 | Azotobacter vinelandii CA6, complete genome | 0 | 1128 | BLASTN svg | BLASTP svg |
NC_012560:4929683 | 4929683 | 4972714 | 43032 | Azotobacter vinelandii DJ, complete genome | 0 | 1128 | BLASTN svg | BLASTP svg |
NC_004129:2609189 | 2609189 | 2632518 | 23330 | Pseudomonas fluorescens Pf-5, complete genome | 0 | 936 | BLASTN svg | BLASTP svg |
NC_004129:4596040* | 4596040 | 4621282 | 25243 | Pseudomonas fluorescens Pf-5, complete genome | 1e-174 | 620 | BLASTN svg | BLASTP svg |
NC_015733:2194676 | 2194676 | 2216285 | 21610 | Pseudomonas putida S16 chromosome, complete genome | 3e-80 | 307 | BLASTN svg | BLASTP svg |
NC_013716:5020204 | 5020204 | 5049052 | 28849 | Citrobacter rodentium ICC168, complete genome | 8e-56 | 226 | BLASTN svg | BLASTP svg |
NC_016002:1938749* | 1938749 | 1962599 | 23851 | Pseudogulbenkiania sp. NH8B, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
NC_008752:3828438 | 3828438 | 3852328 | 23891 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 2e-37 | 165 | BLASTN svg | BLASTP svg |
NC_013716:357928* | 357928 | 406520 | 48593 | Citrobacter rodentium ICC168, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_014910:2779573* | 2779573 | 2803547 | 23975 | Alicycliphilus denitrificans BC chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_010688:4991410 | 4991410 | 5019099 | 27690 | Xanthomonas campestris pv. campestris, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_010120:2098000* | 2098000 | 2127398 | 29399 | Neisseria meningitidis 053442, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_008767:2126854* | 2126854 | 2157111 | 30258 | Neisseria meningitidis FAM18, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_007086:5064053 | 5064053 | 5089251 | 25199 | Xanthomonas campestris pv. campestris str. 8004, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_003902:4989855 | 4989855 | 5016566 | 26712 | Xanthomonas campestris pv. campestris str. ATCC 33913, complete | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_012779:996879 | 996879 | 1020375 | 23497 | Edwardsiella ictaluri 93-146, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_013282:551219* | 551219 | 589047 | 37829 | Cronobacter turicensis, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015422:3184823* | 3184823 | 3206383 | 21561 | Alicycliphilus denitrificans K601 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014306:3210311 | 3210311 | 3257128 | 46818 | Erwinia billingiae Eb661, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_003112:2215184* | 2215184 | 2248030 | 32847 | Neisseria meningitidis MC58, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_020260:3355814 | 3355814 | 3381531 | 25718 | Cronobacter sakazakii Sp291, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015224:3892972* | 3892972 | 3936364 | 43393 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_021066:460292 | 460292 | 519158 | 58867 | Raoultella ornithinolytica B6, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_014924:1762995 | 1762995 | 1789099 | 26105 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009778:1902995 | 1902995 | 1921493 | 18499 | Enterobacter sakazakii ATCC BAA-894, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015663:4950000 | 4950000 | 5019917 | 69918 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013716:2476334 | 2476334 | 2498224 | 21891 | Citrobacter rodentium ICC168, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008027:3953951* | 3953951 | 3978510 | 24560 | Pseudomonas entomophila L48, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007508:5093365 | 5093365 | 5116099 | 22735 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_020063:4127161* | 4127161 | 4153600 | 26440 | Enterobacteriaceae bacterium strain FGI 57, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011894:6793497* | 6793497 | 6817271 | 23775 | Methylobacterium nodulans ORS 2060, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010468:4059436 | 4059436 | 4082356 | 22921 | Escherichia coli ATCC 8739, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
AC_000091:4569379 | 4569379 | 4592543 | 23165 | Escherichia coli W3110 DNA, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |