Pre_GI: BLASTN Hits

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Query: NC_008463:3394000 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 3394000, End: 3416100, Length: 22101

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011770:36260003626000364913423135Pseudomonas aeruginosa LESB58, complete genome040850BLASTN svgBLASTP svg
NC_002516:22228962222896224159918704Pseudomonas aeruginosa PAO1, complete genome032430BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome01128BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome01128BLASTN svgBLASTP svg
NC_004129:26091892609189263251823330Pseudomonas fluorescens Pf-5, complete genome0936BLASTN svgBLASTP svg
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome1e-174620BLASTN svgBLASTP svg
NC_015733:21946762194676221628521610Pseudomonas putida S16 chromosome, complete genome3e-80307BLASTN svgBLASTP svg
NC_013716:50202045020204504905228849Citrobacter rodentium ICC168, complete genome8e-56226BLASTN svgBLASTP svg
NC_016002:1938749*1938749196259923851Pseudogulbenkiania sp. NH8B, complete genome3e-46194BLASTN svgBLASTP svg
NC_008752:38284383828438385232823891Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-37165BLASTN svgBLASTP svg
NC_013716:357928*35792840652048593Citrobacter rodentium ICC168, complete genome3e-18101BLASTN svgBLASTP svg
NC_014910:2779573*2779573280354723975Alicycliphilus denitrificans BC chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010688:49914104991410501909927690Xanthomonas campestris pv. campestris, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_010120:2098000*2098000212739829399Neisseria meningitidis 053442, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_008767:2126854*2126854215711130258Neisseria meningitidis FAM18, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_007086:50640535064053508925125199Xanthomonas campestris pv. campestris str. 8004, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_003902:49898554989855501656626712Xanthomonas campestris pv. campestris str. ATCC 33913, complete7e-1693.7BLASTN svgBLASTP svg
NC_012779:996879996879102037523497Edwardsiella ictaluri 93-146, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013282:551219*55121958904737829Cronobacter turicensis, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014306:32103113210311325712846818Erwinia billingiae Eb661, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003112:2215184*2215184224803032847Neisseria meningitidis MC58, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020260:33558143355814338153125718Cronobacter sakazakii Sp291, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_021066:46029246029251915858867Raoultella ornithinolytica B6, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014924:17629951762995178909926105Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009778:19029951902995192149318499Enterobacter sakazakii ATCC BAA-894, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013716:24763342476334249822421891Citrobacter rodentium ICC168, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007508:50933655093365511609922735Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011894:6793497*6793497681727123775Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010468:40594364059436408235622921Escherichia coli ATCC 8739, complete genome3e-0661.9BLASTN svgBLASTP svg
AC_000091:45693794569379459254323165Escherichia coli W3110 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg