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Query: NC_008463:1756434 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1756434, End: 1777648, Length: 21215

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome07715BLASTN svgBLASTP svg
NC_011770:30498303049830308131431485Pseudomonas aeruginosa LESB58, complete genome04976BLASTN svgBLASTP svg
NC_008463:28485682848568287992931362Pseudomonas aeruginosa UCBPP-PA14, complete genome04908BLASTN svgBLASTP svg
NC_002516:27501282750128277880428677Pseudomonas aeruginosa PAO1, complete genome03178BLASTN svgBLASTP svg
NC_015563:35716823571682359959927918Delftia sp. Cs1-4 chromosome, complete genome9e-148531BLASTN svgBLASTP svg
NC_013422:17326771732677175579823122Halothiobacillus neapolitanus c2, complete genome2e-130474BLASTN svgBLASTP svg
NC_011770:45421834542183456916026978Pseudomonas aeruginosa LESB58, complete genome3e-83317BLASTN svgBLASTP svg
NC_002516:42914429146861625703Pseudomonas aeruginosa PAO1, complete genome5e-63250BLASTN svgBLASTP svg
NC_008343:20500002050000207522725228Granulibacter bethesdensis CGDNIH1, complete genome7e-56226BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-52214BLASTN svgBLASTP svg
NC_020908:50474105047410506517417765Octadecabacter arcticus 238, complete genome2e-41178BLASTN svgBLASTP svg
NC_011770:42901429016842125521Pseudomonas aeruginosa LESB58, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004129:5204500*5204500522581521316Pseudomonas fluorescens Pf-5, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003911:3864852*3864852389829633445Silicibacter pomeroyi DSS-3, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011071:10842108423591025069Stenotrophomonas maltophilia R551-3, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007508:30656213065621309125825638Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008043:86470*8647010848022011Silicibacter sp. TM1040 mega plasmid, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_008786:32917003291700331510623407Verminephrobacter eiseniae EF01-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008686:1960034*1960034199164331610Paracoccus denitrificans PD1222 chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_015947:19373411937341196618728847Burkholderia sp. JV3 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_010688:28501642850164287100220839Xanthomonas campestris pv. campestris, complete genome1e-0560BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome1e-0560BLASTN svgBLASTP svg