Query: NC_008463:1756434 Pseudomonas aeruginosa UCBPP-PA14, complete genome
Start: 1756434, End: 1777648, Length: 21215
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_011770:1811874 | 1811874 | 1836224 | 24351 | Pseudomonas aeruginosa LESB58, complete genome | 0 | 7715 | BLASTN svg | BLASTP svg |
NC_011770:3049830 | 3049830 | 3081314 | 31485 | Pseudomonas aeruginosa LESB58, complete genome | 0 | 4976 | BLASTN svg | BLASTP svg |
NC_008463:2848568 | 2848568 | 2879929 | 31362 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 0 | 4908 | BLASTN svg | BLASTP svg |
NC_002516:2750128 | 2750128 | 2778804 | 28677 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 3178 | BLASTN svg | BLASTP svg |
NC_015563:3571682 | 3571682 | 3599599 | 27918 | Delftia sp. Cs1-4 chromosome, complete genome | 9e-148 | 531 | BLASTN svg | BLASTP svg |
NC_013422:1732677 | 1732677 | 1755798 | 23122 | Halothiobacillus neapolitanus c2, complete genome | 2e-130 | 474 | BLASTN svg | BLASTP svg |
NC_011770:4542183 | 4542183 | 4569160 | 26978 | Pseudomonas aeruginosa LESB58, complete genome | 3e-83 | 317 | BLASTN svg | BLASTP svg |
NC_002516:42914 | 42914 | 68616 | 25703 | Pseudomonas aeruginosa PAO1, complete genome | 5e-63 | 250 | BLASTN svg | BLASTP svg |
NC_008343:2050000 | 2050000 | 2075227 | 25228 | Granulibacter bethesdensis CGDNIH1, complete genome | 7e-56 | 226 | BLASTN svg | BLASTP svg |
NC_008463:282565* | 282565 | 320736 | 38172 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 3e-52 | 214 | BLASTN svg | BLASTP svg |
NC_020908:5047410 | 5047410 | 5065174 | 17765 | Octadecabacter arcticus 238, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
NC_011770:42901 | 42901 | 68421 | 25521 | Pseudomonas aeruginosa LESB58, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_004129:5204500* | 5204500 | 5225815 | 21316 | Pseudomonas fluorescens Pf-5, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_005773:4028500* | 4028500 | 4052099 | 23600 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_007005:2686551* | 2686551 | 2740627 | 54077 | Pseudomonas syringae pv. syringae B728a, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_003911:3864852* | 3864852 | 3898296 | 33445 | Silicibacter pomeroyi DSS-3, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011071:10842 | 10842 | 35910 | 25069 | Stenotrophomonas maltophilia R551-3, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007508:3065621 | 3065621 | 3091258 | 25638 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008043:86470* | 86470 | 108480 | 22011 | Silicibacter sp. TM1040 mega plasmid, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008786:3291700 | 3291700 | 3315106 | 23407 | Verminephrobacter eiseniae EF01-2, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008686:1960034* | 1960034 | 1991643 | 31610 | Paracoccus denitrificans PD1222 chromosome 1, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015947:1937341 | 1937341 | 1966187 | 28847 | Burkholderia sp. JV3 chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_010688:2850164 | 2850164 | 2871002 | 20839 | Xanthomonas campestris pv. campestris, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_008027:4889662* | 4889662 | 4919645 | 29984 | Pseudomonas entomophila L48, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |