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Query: NC_008463:632869:638309 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 638309, End: 638644, Length: 336

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:4404942:441342944134294414199771Pseudomonas mendocina ymp, complete genomeNERD domain-containing protein3e-44176
NC_015556:4025559:403226240322624033032771Pseudomonas fulva 12-X chromosome, complete genomeNERD domain protein3e-39160
NC_009434:695582:713019713019713789771Pseudomonas stutzeri A1501, complete genomehypothetical protein5e-38155
NC_008340:1303607:132155713215571322156600Alkalilimnicola ehrlichei MLHE-1, complete genomeNERD domain protein3e-21100
NC_012108:4454705:446735944673594468132774Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein5e-2199.8
NC_013173:815696:8284458284458295121068Desulfomicrobium baculatum DSM 4028, complete genomeNERD domain protein2e-1270.9
NC_019902:3397170:340366034036603404445786Thioalkalivibrio nitratireducens DSM 14787, complete genomeNERD domain protein1e-1168.6
NC_008702:369965:383349383349384059711Azoarcus sp. BH72, complete genomeconserved hypothetical membrane protein.3e-1063.9
NC_008700:367949:378604378604379386783Shewanella amazonensis SB2B, complete genomeDNA topoisomerase I2e-0961.2
NC_013171:1194500:120040612004061201173768Anaerococcus prevotii DSM 20548, complete genomeNERD domain protein1e-0858.9
NC_011146:2304475:231717723171772317869693Geobacter bemidjiensis Bem, complete genomeNERD domain protein6e-0752.8
NC_012656:1:139113912029639Bacillus anthracis str. A0248 plasmid pXO1, complete sequencehypothetical protein3e-0650.8
NC_012579:1:135213521990639Bacillus anthracis str. CDC 684 plasmid pX01, complete sequencehypothetical protein3e-0650.8
NC_007322:1:112711271765639Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, completehypothetical protein3e-0650.8
NC_014331:1:117611761814639Bacillus cereus biovar anthracis str. CI plasmid pCI-XO1, completetransporter3e-0650.8