Pre_GI: BLASTP Hits

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Query: NC_008463:5246954:5301173 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5301173, End: 5301439, Length: 267

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4885979:490101949010194901339321Pseudomonas putida ND6 chromosome, complete genomeISPpu14, transposase Orf15e-40162
NC_017986:2548720:256416525641652564485321Pseudomonas putida ND6 chromosome, complete genomeISPpu14, transposase Orf15e-40162
NC_010501:30000:422444224442564321Pseudomonas putida W619, complete genometransposase IS3/IS911 family protein2e-39160
NC_002947:4484824:448639544863954486715321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf12e-39160
NC_002947:4994335:503324350332435033563321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf12e-39160
NC_002947:6152500:615486061548606155180321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf15e-39159
NC_002947:4994335:503619150361915036511321Pseudomonas putida KT2440, complete genomeISPpu14, transposase Orf15e-39159
NC_017986:409899:418958418958419278321Pseudomonas putida ND6 chromosome, complete genomeISPpu14, transposase Orf11e-37155
NC_012660:2045398:205981820598182060150333Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase5e-33139
NC_012660:5793200:582548558254855825802318Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transposase2e-31134
NC_020209:397376:429924429924430241318Pseudomonas poae RE*1-1-14, complete genomeISPpu14, transposase Orf13e-28123
NC_007005:830467:849022849022849339318Pseudomonas syringae pv. syringae B728a, complete genome2e-2097.4
NC_004578:6334735:635962463596246359956333Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1477.4
NC_020209:1949500:196102319610231961355333Pseudomonas poae RE*1-1-14, complete genomehypothetical protein8e-1475.9
NC_016830:2642881:264842826484282648760333Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein2e-1374.7
NC_016830:5994494:601302060130206013352333Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein2e-1374.7
NC_016830:952342:964653964653964985333Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein2e-1374.7
NC_016830:3869572:392236539223653922730366Pseudomonas fluorescens F113 chromosome, complete genometransposase is3 is911 family protein6e-1372.8
NC_004578:4869673:488083348808334881072240Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1271.2
NC_015379:4630367:464368946436894644021333Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family2e-1270.9
NC_015379:2575000:259716425971642597505342Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family3e-1270.5
NC_015379:908904:964303964303964644342Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transposase, IS66 family3e-1270.5
NC_010512:1015557:104074910407491041132384Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetransposase IS3/IS911 family protein2e-1064.7
NC_020260:882307:911330911330911593264Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-1063.9
NC_009649:16907:427744277443037264Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,hypothetical protein3e-1063.9
NC_011000:1262324:126717112671711267554384Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase3e-1063.5
NC_011000:3514338:354232235423223542705384Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase3e-1063.5
NC_011992:1234610:125100112510011251339339Acidovorax ebreus TPSY, complete genometransposase IS3/IS911 family protein7e-1062.8
NC_016626:1592781:159875015987501599136387Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative transposase3e-0960.5
NC_015572:1252000:125556412555641255971408Methylomonas methanica MC09 chromosome, complete genometransposase IS3/IS911 family protein6e-0959.7
NC_014394:2577949:259843525984352598797363Gallionella capsiferriformans ES-2 chromosome, complete genometransposase IS3/IS911 family protein1e-0858.9
NC_007908:3363902:338422333842233384627405Rhodoferax ferrireducens T118, complete genometransposase IS3/IS9119e-0958.9
NC_007908:1252189:125737812573781257782405Rhodoferax ferrireducens T118, complete genometransposase IS3/IS9119e-0958.9
NC_008782:2568027:261179026117902612242453Acidovorax sp. JS42, complete genometransposase IS3/IS911 family protein1e-0858.5
NC_010676:2869936:287185728718572872336480Burkholderia phytofirmans PsJN chromosome 2, complete sequencetransposase IS3/IS911 family protein1e-0858.2
NC_010170:1152131:115835911583591158745387Bordetella petrii, complete genometransposase2e-0858.2
NC_002655:3919545:392180139218013922475675Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc85e-0856.2
NC_002695:3852233:385448938544893855163675Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-0856.2
NC_011353:3956630:395888639588863959560675Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISSfl4 ORF15e-0856.2
NC_013008:3911356:391361239136123914286675Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-0856.2
NC_013941:3676146:367840236784023679076675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISSfl3 OrfA2e-0755.1
NC_007951:2233676:224135922413592241745387Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein1e-0755.1
NC_007952:1293024:130614713061471306533387Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein1e-0755.1
NC_014910:1591003:159744815974481597876429Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein1e-0755.1
NC_015422:2858228:291509529150952915523429Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein1e-0755.1
NC_014910:1912552:192794719279471928375429Alicycliphilus denitrificans BC chromosome, complete genometransposase is3/is911 family protein1e-0755.1
NC_015422:3184823:319825931982593198687429Alicycliphilus denitrificans K601 chromosome, complete genometransposase IS3/IS911 family protein1e-0755.1
AP010958:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-0754.7
AP010958:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-0754.7
NC_011601:3338888:334114433411443341818675Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6832e-0754.7
NC_013353:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-0754.7
NC_013353:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-0754.7
NC_008752:725189:767892767892768236345Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase IS3/IS911 family protein2e-0754.3
NC_007607:87000:116076116076116663588Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl4 ORF17e-0752.8
NC_004741:366822:385926385926386423498Shigella flexneri 2a str. 2457T, complete genomeISSfl3 orfA1e-0652.4
NC_007607:87000:901639016390831669Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative transposase1e-0652.4
NC_007385:157516:161897161897162565669Shigella sonnei Ss046 plasmid pSS_046, complete sequenceputative transposase9e-0752.4
NC_008258:401786:423776423776424450675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF19e-0752.4
NC_008258:2045000:205991720599172060591675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF19e-0752.4
NC_004337:367687:386125386125386799675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF19e-0752.4
NC_017319:155958:169634169634170308675Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF19e-0752.4
NC_017328:385552:403989403989404663675Shigella flexneri 2002017 chromosome, complete genomeISSfl4 ORF19e-0752.4
NC_017319:155958:173413173413174042630Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF18e-0752.4
NC_004337:3590323:385190438519043852578675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF18e-0752.4
NC_004851:157675:173438173438174112675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF18e-0752.4
NC_013716:3708415:372254337225433723220678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_013716:2476334:248499424849942485671678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_009801:3374501:338814533881453388822678Escherichia coli E24377A, complete genomeIS66 family element, orf11e-0652
NC_009790:42112:442404424044917678Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element, orf11e-0652
NC_007510:1959883:200343920034392003855417Burkholderia sp. 383 chromosome 1, complete sequencetransposase IS3/IS9111e-0652
NC_013361:3313284:331480333148033315450648Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-0652
NC_013716:1138441:114611011461101146787678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_013716:4824541:483553548355354836212678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_013716:2764550:279093027909302791607678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_013716:4306695:431035743103574311034678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_013716:3327881:335750833575083358185678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_013716:2764550:279183027918302792507678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A1e-0652
NC_003047:3360000:336349033634903363951462Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-0652
NC_004851:157675:169705169705170379675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF11e-0652
NC_015458:2998000:300163430016343002077444Pusillimonas sp. T7-7 chromosome, complete genometransposase IS3/IS9111e-0651.6
NC_009801:1756610:175854817585481759012465Escherichia coli E24377A, complete genomeIS66 family element, orf11e-0651.6
NC_010660:33109:376623766238081420Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf11e-0651.6
NC_010002:3399770:340977834097783410221444Delftia acidovorans SPH-1, complete genometransposase IS3/IS911 family protein1e-0651.6
NC_013361:3867558:389845438984543898939486Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-0651.6
NC_007951:4741620:475864047586404759164525Burkholderia xenovorans LB400 chromosome 1, complete sequenceputative ISPpu14, transposase Orf13e-0650.4
NC_007951:2087385:211497721149772115459483Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase, ISPpu14 Orf1 like3e-0650.4
NC_007948:360199:362086362086362589504Polaromonas sp. JS666, complete genometransposase IS3/IS9114e-0650.1