Pre_GI: BLASTP Hits

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Query: NC_008463:5246954:5286291 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5286291, End: 5287619, Length: 1329

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4611877461187746132561380Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilus protein PilV8e-149527
NC_018080:5091772:5131282513128251326611380Pseudomonas aeruginosa DK2 chromosome, complete genometype IV pilus protein PilV4e-147521
NC_004129:5373886:5408742540874254099531212Pseudomonas fluorescens Pf-5, complete genometype IV prepilin PilV, putative7e-84311
NC_005126:1223042:1236988123698812381781191Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-47190
NC_009708:4182460:4202151420215142034281278Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeshufflon protein3e-47189
NC_005773:866157:889863889863890840978Pseudomonas syringae pv. phaseolicola 1448A, complete genometype IV pilus protein PilV2, putative, truncated6e-47188
NC_012751:1296877:1310861131086113122251365Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilV type IV pilus minor pilin subunit, shufflon protein1e-40167
NC_012751:942315:9483479483479496151269Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilV type IV pilus minor pilin subunit, shufflon protein2e-40166
NC_012214:3502992:3507968350796835093801413Erwinia pyrifoliae Ep1/96, complete genometype IV prepilin2e-33144
NC_007507:11000:2002320023215101488Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilV-like type IV prepilin5e-32139
NC_010682:1624985:1632361163236116336591299Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein9e-22105
NC_007950:185500:1938351938351953581524Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein9e-21101
NC_004547:611178:6140716140716154651395Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus prepilin protein1e-1378.2
NC_008253:1938975:1950936195093619523991464Escherichia coli 536, complete genomePilV-like protein2e-1067.4
NC_004431:2185750:2197781219778121992441464Escherichia coli CFT073, complete genomePilV-like protein2e-1067.4
NC_011601:2139188:2163561216356121650241464Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-1067.4
NC_011149:1987291:2001320200132020027561437Salmonella enterica subsp. enterica serovar Agona str. SL483,prepilin-type N- cleavage/methylation domain protein1e-0861.6
NC_010338:3743000:3779149377914937818482700Caulobacter sp. K31, complete genomehypothetical protein3e-0860.5
NC_015224:3587500:3601516360151636028321317Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Large exoprotein involved in heme utilization or adhesion2e-0757.8
NC_016832:948029:9668079668079682281422Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Prepilin-type N-cleavage/methylation domain protein4e-0756.6