Pre_GI: BLASTP Hits

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Query: NC_008463:5246954:5260143 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5260143, End: 5260397, Length: 255

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:5091772:510681651068165107085270Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA binding protein7e-37152
NC_009656:4527457:458569645856964585965270Pseudomonas aeruginosa PA7 chromosome, complete genomeputative DNA binding protein4e-34142
NC_007005:1705406:171913017191301719393264Pseudomonas syringae pv. syringae B728a, complete genomeArc-like DNA binding8e-0855.8
NC_004129:5204500:521111852111185211444327Pseudomonas fluorescens Pf-5, complete genomealginate biosynthesis transcriptional activator8e-0752.4
NC_005773:4028500:404331040433104043636327Pseudomonas syringae pv. phaseolicola 1448A, complete genomealginate biosynthesis transcriptional activator1e-0652
NC_009255:1369200:137922613792261379582357Burkholderia vietnamiensis G4 chromosome 2, complete sequenceArc domain-containing protein2e-0651.2
NC_015563:3786192:378969837896983790099402Delftia sp. Cs1-4 chromosome, complete genomeArc domain-containing protein3e-0650.4
NC_010002:3785313:380321838032183803691474Delftia acidovorans SPH-1, complete genomeArc domain protein DNA binding domain protein3e-0650.4