Pre_GI: BLASTP Hits

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Query: NC_008463:5246954:5259130 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5259130, End: 5260146, Length: 1017

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4583766458376645847881023Pseudomonas aeruginosa PA7 chromosome, complete genomenucleoid-associated protein NdpA0685
NC_018080:5091772:5104886510488651059081023Pseudomonas aeruginosa DK2 chromosome, complete genomenucleoid-associated protein NdpA0668
NC_015556:1188500:1218671121867112196781008Pseudomonas fulva 12-X chromosome, complete genomeNucleoid-associated protein ndpA3e-169594
NC_005773:1333863:1344087134408713450881002Pseudomonas syringae pv. phaseolicola 1448A, complete genomenucleoid-associated protein NdpA3e-160564
NC_004129:5373886:5384686538468653858011116Pseudomonas fluorescens Pf-5, complete genomenucleoid-associated protein NdpA5e-149527
NC_005244:37546:406234062341384762Pseudomonas sp. ND6 plasmid pND6-1, complete sequencehypothetical protein2e-97355
NC_008322:2716676:2716676271667627177041029Shewanella sp. MR-7, complete genome37kDa nucleoid-associated protein3e-63242
NC_011663:2123388:2142618214261821436461029Shewanella baltica OS223 chromosome, complete genomenucleoid-associated protein NdpA1e-61237
NC_009092:1684467:1697585169758516986161032Shewanella loihica PV-4, complete genome37 kDa nucleoid-associated protein3e-60232
NC_014618:1593360:1607541160754116085451005Enterobacter cloacae SCF1 chromosome, complete genome37kDa nucleoid-associated protein5e-58224
NC_007005:3414579:342426134242613424794534Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein5e-57221
NC_011083:2375061:2375061237506123760681008Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,nucleoid-associated protein NdpA2e-56219
NC_003197:2327474:2327474232747423284811008Salmonella typhimurium LT2, complete genomenucleoid-associated protein NdpA2e-56219
NC_010102:683444:7173287173287183351008Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-56219
NC_006511:682863:7026397026397036461008Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCnucleoid-associated protein NdpA2e-56219
NC_004631:685357:7098467098467108531008Salmonella enterica subsp. enterica serovar Typhi Ty2, completenucleoid-associated protein NdpA2e-56219
NC_011147:682897:7025857025857035921008Salmonella enterica subsp. enterica serovar Paratyphi A strnucleoid-associated protein NdpA2e-56219
NC_016810:2325190:2325190232519023261971008Salmonella enterica subsp. enterica serovar Typhimurium strnucleoid-asociated protein2e-56219
NC_016856:2379027:2379027237902723800341008Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Snucleoid-associated protein NdpA2e-56219
NC_016857:2325190:2325190232519023261971008Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74nucleoid-associated protein NdpA2e-56219
NC_016860:2323017:2323017232301723240241008Salmonella enterica subsp. enterica serovar Typhimurium strnucleoid-associated protein NdpA2e-56219
NC_016863:2324293:2327219232721923282261008Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1nucleoid-associated protein NdpA2e-56219
NC_017046:2324554:2324554232455423255611008Salmonella enterica subsp. enterica serovar Typhimurium str. 798nucleoid-asociated protein2e-56219
NC_016831:687549:7117377117377127441008Salmonella enterica subsp. enterica serovar Gallinarum/pullorumnucleoid-asociated protein6e-56218
NC_010067:660659:6786796786796796861008Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-55217
NC_012917:1840172:1882018188201818830251008Pectobacterium carotovorum subsp. carotovorum PC1, complete genome37kDa nucleoid-associated protein5e-55215
NC_012912:2800884:2800884280088428018941011Dickeya zeae Ech1591, complete genome37kDa nucleoid-associated protein6e-55214
NC_020064:3157656:3160926316092631619331008Serratia marcescens FGI94, complete genomenucleoid-associated protein2e-53209
NC_016816:1545354:1575332157533215763361005Pantoea ananatis LMG 5342, complete genome37 kDa nucleoid-associated protein2e-52206
NC_015566:3622385:3624674362467436256841011Serratia sp. AS12 chromosome, complete genomenucleoid-associated protein ndpA3e-52205
NC_004603:2235142:223654022365402237538999Vibrio parahaemolyticus RIMD 2210633 chromosome I, completenucleoid-associated protein NdpA7e-52204
NC_013961:2370994:2374189237418923751931005Erwinia amylovora, complete genomeNucleoid-associated protein ndpA3e-51202
NC_013971:2408522:2411717241171724127211005Erwinia amylovora ATCC 49946 chromosome, complete genomenucleoid-associated protein3e-51202
NC_014965:2200974:220097422009742201912939Vibrio vulnificus MO6-24/O chromosome I, complete sequencenucleoid-associated protein NdpA2e-49196
NC_006512:728281:7313987313987324411044Idiomarina loihiensis L2TR, complete genomenucleoid-associated protein NdpA8e-47187
NC_007498:1148249:1161344116134411623781035Pelobacter carbinolicus DSM 2380, complete genomeputative nucleoid-associated protein NdpA5e-40165
NC_005773:1333863:135025213502521350866615Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein2e-39162
NC_005244:37546:413384133841625288Pseudomonas sp. ND6 plasmid pND6-1, complete sequencehypothetical protein3e-38159
NC_005140:960261:969265969265970263999Vibrio vulnificus YJ016 chromosome II, complete sequencenucleoid-associated protein NdpA1e-35150
NC_007492:3462929:3493847349384734948871041Pseudomonas fluorescens PfO-1, complete genome37kDa nucleoid-associated protein2e-34146
NC_015633:2919501:2926804292680429278321029Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein1e-28127
NC_010814:1441327:1456119145611914572341116Geobacter lovleyi SZ, complete genomehypothetical protein6e-28125
NC_004129:5723787:5741341574134157424711131Pseudomonas fluorescens Pf-5, complete genomehypothetical protein5e-1995.5
NC_010688:1192410:1201695120169512028761182Xanthomonas campestris pv. campestris, complete genomehypothetical protein7e-1891.7
NC_015577:427752:4338304338304348581029Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein7e-1168.2