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Query: NC_008463:4867504:4884920 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 4884920, End: 4885870, Length: 951

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006510:2910000:292648229264822927423942Geobacillus kaustophilus HTA426, complete genomeferrichrome ABC transporter (substrate-binding protein)3e-1066.2
NC_014915:3039639:304614030461403047081942Geobacillus sp. Y412MC52 chromosome, complete genomeperiplasmic binding protein3e-1066.2
NC_001263:2574755:2595145259514525961521008Deinococcus radiodurans R1 chromosome 1, complete sequenceiron ABC transporter, periplasmic substrate-binding protein, putative2e-0963.2
NC_015573:2187688:2205510220551022065471038Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein3e-0962.8
NC_011992:1038985:105606410560641056954891Acidovorax ebreus TPSY, complete genomeperiplasmic binding protein9e-0961.2
NC_008010:105665:126435126435127304870Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceperiplasmic binding protein2e-0860.1
NC_014622:1514416:1520936152093615219431008Paenibacillus polymyxa SC2 chromosome, complete genomeABC transporter substrate-binding protein4e-0859.3
NC_015680:21500:5110851108530751968Pyrococcus yayanosii CH1 chromosome, complete genomePeriplasmic binding protein7e-0858.5
NC_014483:1376500:1383180138318013841871008Paenibacillus polymyxa E681 chromosome, complete genomeABC-type Fe3+-hydroxamate transport system, periplasmic component6e-0858.5
NC_015275:820723:8322618322618332621002Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, periplasmic subunit6e-0858.5
NC_009922:2487492:2503785250378525048281044Alkaliphilus oremlandii OhILAs, complete genomeperiplasmic binding protein6e-0858.5
NC_014831:1557485:1558876155887615599131038Thermaerobacter marianensis DSM 12885 chromosome, complete genomeperiplasmic binding protein5e-0858.5
NC_005957:4311679:432630743263074327281975Bacillus thuringiensis serovar konkukian str. 97-27, completeiron compound ABC transporter, iron compound-binding protein9e-0857.8
NC_008782:1136732:115380511538051154695891Acidovorax sp. JS42, complete genomeperiplasmic binding protein9e-0857.8
NC_008262:227354:266403266403267290888Clostridium perfringens SM101, complete genomeferrichrome ABC transporter (binding protein)-like protein lin22882e-0756.6
NC_003366:255480:294576294576295463888Clostridium perfringens str. 13, complete genomeferrichrome ABC transporter4e-0755.8
NC_008701:195850:2139832139832160312049Pyrobaculum islandicum DSM 4184, complete genomeperiplasmic binding protein5e-0755.5
NC_016641:3173250:3180233318023331812371005Paenibacillus terrae HPL-003 chromosome, complete genomeFe3+-hydroxamate ABC transporter periplasmic protein4e-0652.4