Pre_GI: BLASTP Hits

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Query: NC_008463:4743296:4760148 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 4760148, End: 4760960, Length: 813

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002516:891000:896416896416897228813Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-157555
NC_009512:3618055:362657136265713627377807Pseudomonas putida F1, complete genomeHNH endonuclease2e-95348
NC_017506:3248724:326074032607403261546807Marinobacter adhaerens HP15 chromosome, complete genomeHNH endonuclease3e-63241
NC_014973:3452100:346505734650573465821765Geobacter sp. M18 chromosome, complete genomeHNH endonuclease2e-26119
NC_014216:2538500:255566525556652555979315Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein4e-25115
NC_006177:2398482:242404824240482424860813Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-24113
NC_014306:1810548:181883218188321819554723Erwinia billingiae Eb661, complete genomepredicted endonuclease1e-22107
NC_016822:1431200:144442814444281445171744Shigella sonnei 53G, complete genomeendonuclease2e-22106
NC_012108:442493:4548374548374559641128Desulfobacterium autotrophicum HRM2, complete genomeputative 5-methylcytosine-specific restriction enzyme A1e-21103
NC_009648:5119271:513275851327585133360603Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein7e-21100
NC_012731:600518:653235653235653873639Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein8e-21100
NC_010322:5293652:530890053089005309745846Pseudomonas putida GB-1 chromosome, complete genomeHNH endonuclease1e-20100
NC_010814:243384:261791261791262636846Geobacter lovleyi SZ, complete genomeHNH endonuclease2e-2099.8
NC_011283:4966471:497312949731294973767639Klebsiella pneumoniae 342 chromosome, complete genomeHNH endonuclease domain protein1e-1997.4
NC_010498:4899167:490781649078164908457642Escherichia coli SMS-3-5, complete genomeHNH endonuclease domain-containing protein1e-1893.6
NC_021150:4929670:493840049384004939143744Azotobacter vinelandii CA6, complete genomehypothetical protein2e-1892.8
NC_012560:4929683:493841349384134939156744Azotobacter vinelandii DJ, complete genomehypothetical protein2e-1892.8
NC_013730:3729626:3748609374860937497121104Spirosoma linguale DSM 74, complete genomeHNH endonuclease3e-1892.4
NC_012673:2064298:2073393207339320744331041Exiguobacterium sp. AT1b, complete genomeHNH endonuclease3e-1892.4
NC_014934:219000:229015229015229824810Cellulophaga algicola DSM 14237 chromosome, complete genomehnh endonuclease4e-1892
NC_011206:1379068:138427413842741384912639Acidithiobacillus ferrooxidans ATCC 53993, complete genomerestriction endonuclease-like protein7e-1890.9
NC_013364:928486:940873940873941613741Escherichia coli O111:H- str. 11128, complete genomeendonuclease-like protein1e-1790.5
NC_013353:922937:935324935324936064741Escherichia coli O103:H2 str. 12009, complete genomeendonuclease1e-1790.5
AP010958:922937:935324935324936064741Escherichia coli O103:H2 str. 12009 DNA, complete genomeendonuclease-like protein1e-1790.5
NC_014220:70490:896678966790407741Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeHNH endonuclease4e-1788.6
NC_013361:5580741:558447255844725585122651Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendonuclease4e-1788.6
NC_014206:2807879:281779028177902818551762Geobacillus sp. C56-T3 chromosome, complete genomeHNH endonuclease5e-1788.2
NC_014836:2620871:263431826343182635073756Desulfurispirillum indicum S5 chromosome, complete genomeHNH endonuclease3e-1685.9
NC_019896:3491000:350933435093343509681348Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein5e-1685.1
NC_010322:1817598:185091618509161851860945Pseudomonas putida GB-1 chromosome, complete genomerestriction endonuclease-like protein8e-1684.3
NC_015942:1920693:193747819374781938242765Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHNH endonuclease6e-1581.3
NC_010571:637398:653983653983654768786Opitutus terrae PB90-1, complete genomerestriction endonuclease-like protein5e-1478.6
NC_015379:6023926:603265360326536033618966Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-1374.3
NC_021184:1729867:1768097176809717693171221Desulfotomaculum gibsoniae DSM 7213, complete genomeputative restriction endonuclease8e-1374.3
NC_004129:4434259:444774744477474448595849Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-1272.4
NC_013730:3729626:375240937524093753212804Spirosoma linguale DSM 74, complete genomeHNH endonuclease8e-1271.2
NC_008346:2523289:253364525336452534469825Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeHnh endonuclease9e-1270.9
NC_012796:4075583:416030941603094161064756Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1169.7
NC_010334:2131939:213883721388372139706870Shewanella halifaxensis HAW-EB4, complete genomerestriction endonuclease-like protein2e-1066.2
NC_007347:1:117721177212521750Ralstonia eutropha JMP134 chromosome 1, complete sequenceHNH endonuclease3e-1065.9
NC_007530:3462624:348605534860553486690636Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein4e-1065.5
NC_008435:604772:626347626347627216870Rhodopseudomonas palustris BisA53, complete genomerestriction endonuclease-like protein1e-0963.9
NC_016002:1975000:198891019889101989800891Pseudogulbenkiania sp. NH8B, complete genomeHNH endonuclease3e-0962.8
NC_009485:5171658:518387251838725184723852Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein6e-0858.2
NC_015576:1442713:144833114483311449320990Mycobacterium sp. JDM601 chromosome, complete genomeHNH endonuclease8e-0857.8
NC_016582:6999074:701308770130877013824738Streptomyces bingchenggensis BCW-1 chromosome, complete genomeHNH endonuclease8e-0754.3
NC_015957:336500:345618345618346355738Streptomyces violaceusniger Tu 4113 chromosome, complete genomeHNH endonuclease8e-0754.3
NC_009485:584707:592423592423593280858Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein3e-0652.8