Pre_GI: BLASTP Hits

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Query: NC_008463:3168837:3187110 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 3187110, End: 3188081, Length: 972

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:3088866:309571130957113096682972Pseudomonas aeruginosa DK2 chromosome, complete genomecointegrate resolution protein S0666
NC_009656:3127240:316451031645103165481972Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrate resolution protein S0666
NC_015410:2698572:271550727155072716487981Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein1e-122439
NC_009439:2427120:247785424778542478813960Pseudomonas mendocina ymp, complete genomephage integrase family protein2e-122438
NC_018080:3088866:312118031211803122172993Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase family protein1e-120433
NC_017986:5867782:586819858681985869166969Pseudomonas putida ND6 chromosome, complete genomecointegrase4e-103374
NC_009138:1518315:152966615296661530664999Herminiimonas arsenicoxydans, complete genomeunknown prophage; integrase-like protein (Cointegrate resolution protein S) (partial)6e-103374
NC_009659:1984980:198761919876191988593975Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S1e-100366
NC_009659:1923925:196707519670751968007933Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S8e-96350
NC_011662:2374955:238053023805302381471942Thauera sp. MZ1T, complete genomeintegrase family protein5e-95347
NC_007508:2756945:2770341277034127716151275Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecointegrate resolution protein S2e-94345
NC_020541:2191600:220585722058572206834978Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC4e-94344
NC_020541:2264521:227697222769722277952981Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC5e-94344
NC_016147:623666:6367486367486380191272Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative phage integrase1e-93343
NC_008750:2332000:2337459233745923387091251Shewanella sp. W3-18-1, complete genomephage integrase family protein3e-91335
NC_013166:1341575:135602813560281356969942Kangiella koreensis DSM 16069, complete genomeintegrase family protein6e-88324
NC_010501:2511887:253435325343532535288936Pseudomonas putida W619, complete genomeintegrase family protein5e-85314
NC_007507:101887:123354123354124199846Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S1e-77290
NC_007507:101887:104425104425105138714Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S1e-64246
NC_013958:29548:341623416235157996Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceintegrase domain protein SAM domain protein4e-45182
NC_009656:3127240:314265631426563143531876Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrase3e-44179
NC_011138:3182807:3198680319868031996901011Alteromonas macleodii 'Deep ecotype', complete genomePhage integrase5e-41168
NC_008739:41793:6420664206653481143Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencephage integrase family protein3e-40166
NC_008573:195317:2039462039462049681023Shewanella sp. ANA-3 plasmid 1, complete sequencephage integrase family protein4e-39162
NC_016812:258500:2835232835232845601038Sinorhizobium fredii HH103, complete genomeintegrase family protein3e-38159
NC_011894:983572:995769995769996758990Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein3e-29129
NC_013206:21288:386753867539646972Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446integrase family protein5e-25115
NC_010510:409469:416469416469417404936Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein4e-24112
NC_007677:771168:8244758244758265382064Salinibacter ruber DSM 13855, complete genomePhage integrase, N-terminal SAM-like domain protein7e-21101
NC_006672:47610:4761047610490581449Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceIntegrase-like protein2e-20100
NC_014032:825793:9156479156479177042058Salinibacter ruber M8 chromosome, complete genometyrosine recombinase XerD1e-1894.4
NC_013211:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, completephage DNA recombinase2e-1893.6
NC_017105:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_020,phage DNA recombinase2e-1893.6
NC_017113:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-020, completephage DNA recombinase2e-1893.6
NC_017118:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-020, completephage DNA recombinase2e-1893.6
NC_017122:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, completephage DNA recombinase2e-1893.6
NC_017126:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-020, completephage DNA recombinase2e-1893.6
NC_017131:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-020, completephage DNA recombinase2e-1893.6
NC_017149:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-020, completephage DNA recombinase2e-1893.6
NC_010511:3674178:372811937281193729042924Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein3e-1892.8
NC_012988:3288253:330339033033903304355966Methylobacterium extorquens DM4, complete genomeintegrase7e-1788.2
NC_019012:61360:825028250283473972Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequenceIntegrase/recombinase xerD-like protein2e-1686.7
NC_007507:101887:104170104170104373204Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,cointegrate resolution protein S fragment3e-1686.3
NC_013732:136673:143650143650144639990Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequenceintegrase family protein3e-1685.9
NC_012988:2455807:2500951250095125021231173Methylobacterium extorquens DM4, complete genomeintegrase/recombinase protein7e-1478.2
NC_014159:37920:5369553695548791185Tsukamurella paurometabola DSM 20162 plasmid pTpau01, completeintegrase family protein9e-1477.8
NC_011071:2207385:2213586221358622146651080Stenotrophomonas maltophilia R551-3, complete genomeintegrase family protein7e-1375.1
NC_017075:2733898:2742785274278527438431059Rubrivivax gelatinosus IL144, complete genomeintegrase family protein1e-1274.3
NC_013235:3129384:313222031322203133188969Nakamurella multipartita DSM 44233, complete genomeintegrase family protein2e-1273.6
NC_014541:2122788:212976021297602130719960Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein2e-1273.6
NC_018524:4848154:4876338487633848775551218Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephage integrase family protein4e-1272.4
NC_010510:388885:3984003984003994611062Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein5e-1272
NC_011887:110618:1319371319371329981062Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeintegrase family protein5e-1272
NC_009621:389181:3891813891813903561176Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequencephage integrase family protein1e-1171.2
NC_003037:1245645:1264010126401012651671158Sinorhizobium meliloti 1021 plasmid pSymA, complete sequencepossible integrase-like protein3e-1169.3
NC_017986:5797044:5815353581535358164681116Pseudomonas putida ND6 chromosome, complete genomephage integrase4e-1169.3
NC_010943:2499092:251503325150332515743711Stenotrophomonas maltophilia K279a, complete genomeputative integrase4e-1168.9
NC_010943:2499092:2500946250094625021151170Stenotrophomonas maltophilia K279a, complete genomeputative integrase7e-1168.2
NC_007333:1743890:1790694179069417917251032Thermobifida fusca YX, complete genomeputative integrase/recombinase3e-1066.2
NC_009656:3127240:3143692314369231447921101Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase7e-0961.6
NC_014210:2597000:2611347261134726125881242Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein8e-0961.6
NC_011758:247666:2655772655772666381062Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeintegrase family protein2e-0860.1
NC_009438:236424:254905254905255900996Shewanella putrefaciens CN-32 chromosome, complete genomephage integrase family protein5e-0858.5
NC_010162:1767296:178052317805231781320798Sorangium cellulosum 'So ce 56', complete genomeintegrase-like protein9e-0858.2
NC_018080:3088866:3106744310674431078651122Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase1e-0757.4
NC_008536:8541267:856873485687348569168435Solibacter usitatus Ellin6076, complete genomehypothetical protein2e-0756.6
NC_016628:193000:215655215655216623969Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceDNA integration/recombination/inversion protein5e-0755.5
NC_014729:1908086:191853019185301919465936Halogeometricum borinquense DSM 11551 chromosome, complete genomesite-specific recombinase xerd6e-0755.5
NC_008269:577111:5820615820615832601200Rhodococcus sp. RHA1 plasmid pRHL1, complete sequenceprobable integrase6e-0755.5
NC_013956:4490000:449623744962374497139903Pantoea ananatis LMG 20103 chromosome, complete genomeCre4e-0652.4
NC_016817:185000:1914351914351924721038Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequenceCre recombinase5e-0652.4