Pre_GI: BLASTP Hits

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Query: NC_008463:3168837:3180518 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 3180518, End: 3180880, Length: 363

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:3088866:310291231029123103274363Pseudomonas aeruginosa DK2 chromosome, complete genometpnA repressor protein9e-64241
NC_018080:3088866:311124031112403111602363Pseudomonas aeruginosa DK2 chromosome, complete genometnpA repressor protein8e-25112
NC_011662:2374955:238145923814592381815357Thauera sp. MZ1T, complete genomeTn4652, TnpA repressor protein TnpC, putative1e-1478.2
NC_007434:2290934:230048023004802300845366Burkholderia pseudomallei 1710b chromosome I, complete sequencetnpC1e-0961.6
NC_009254:637952:682543682543682908366Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTnpC2e-0961.6
NC_008782:1917634:192229619222961922643348Acidovorax sp. JS42, complete genomehypothetical protein2e-0961.2