Pre_GI: BLASTP Hits

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Query: NC_008463:282565:316965 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 316965, End: 318164, Length: 1200

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010730:952574:965468965468965860393Sulfurihydrogenibium sp. YO3AOP1, complete genomeresponse regulator receiver protein2e-0963.9
NC_013385:1882549:189888318988831899572690Ammonifex degensii KC4, complete genometwo component transcriptional regulator, winged helix family4e-0963.2
NC_009937:673820:692651692651693034384Azorhizobium caulinodans ORS 571, complete genomeCheY-like response regulator5e-0962.4
NC_009615:1469642:1508002150800215091261125Parabacteroides distasonis ATCC 8503 chromosome, complete genometwo-component hybrid sensor kinase/response regulator8e-0962
NC_012438:1211940:123804312380431238435393Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomechemotaxis protein CheY8e-0962
NC_019745:2346970:2362351236235123671774827Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase2e-0860.8
NC_010125:1538335:157275015727501573436687Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulatory protein kdpE4e-0859.7
NC_015172:850802:867688867688868371684Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometwo component transcriptional regulator, winged helix family4e-0859.7
NC_018870:1506918:151385015138501514794945Thermacetogenium phaeum DSM 12270 chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase4e-0859.3
NC_004663:2014035:2021666202166620256313966Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system sensor histidine kinase/response regulator, hybrid ('one-component system')7e-0858.9
NC_017192:2469667:248355124835512483922372Arcobacter sp. L, complete genomechemotaxis protein CheY6e-0858.9
NC_013946:879199:8932778932778960122736Meiothermus ruber DSM 1279 chromosome, complete genomeCheA signal transduction histidine kinase8e-0858.5
NC_017192:2153461:2173446217344621745881143Arcobacter sp. L, complete genometruncated two-component response regulator8e-0858.5
NC_010814:2394250:241320424132042414049846Geobacter lovleyi SZ, complete genomeresponse regulator receiver protein8e-0858.5
NC_012917:2971702:297170229717022972091390Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeresponse regulator receiver protein1e-0757.8
NC_014926:795549:800387800387800788402Thermovibrio ammonificans HB-1 chromosome, complete genomeresponse regulator receiver protein1e-0757.8
NC_014328:522045:543360543360544055696Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator1e-0757.8
NC_008786:3323167:3366753336675333727045952Verminephrobacter eiseniae EF01-2, complete genomeCheA signal transduction histidine kinases2e-0757.4
NC_012880:1765920:180183918018391802228390Dickeya dadantii Ech703, complete genomeresponse regulator receiver protein2e-0757.4
NC_014314:238043:278609278609279148540Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeresponse regulator receiver protein3e-0757
NC_012796:3267569:327648032764803276872393Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheY3e-0757
NC_008312:4795204:4813106481310648166243519Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase2e-0757
NC_014500:3071764:307963130796313080020390Dickeya dadantii 3937 chromosome, complete genomechemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components cheY2e-0757
NC_015682:1457004:1467321146732114698972577Thermodesulfobacterium sp. OPB45 chromosome, complete genomeCheA signal transduction histidine kinase2e-0757
NC_009614:769851:7698517698517737833933Bacteroides vulgatus ATCC 8482 chromosome, complete genometwo-component system sensor histidine kinase/response regulator, hybrid3e-0756.6
NC_014314:1148000:116751511675151168204690Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completewinged helix family two component transcriptional regulator3e-0756.6
NC_009089:1283000:129112412911241291816693Clostridium difficile 630, complete genometwo-component response regulator3e-0756.6
NC_020409:168916:179959179959180339381Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeChemotaxis protein CheY3e-0756.6
NC_013592:1668092:170579217057921706181390Dickeya dadantii Ech586, complete genomeresponse regulator receiver protein3e-0756.6
NC_004663:3502745:3518178351817835220953918Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system sensor histidine kinase/response regulator, hybrid ('one component system')4e-0756.2
NC_008554:840079:861154861154861837684Syntrophobacter fumaroxidans MPOB, complete genometwo component transcriptional regulator, winged helix family4e-0756.2
NC_007356:202131:210286210286210969684Dehalococcoides sp. CBDB1, complete genomeDNA-binding response regulator4e-0756.2
NC_001264:28266:534665346653915450Deinococcus radiodurans R1 chromosome 2, complete sequenceresponse regulator4e-0756.2
NC_014828:541874:561431561431562174744Ethanoligenens harbinense YUAN-3 chromosome, complete genometwo component transcriptional regulator, winged helix family4e-0756.2
NC_014533:1:3621362191615541Cyanothece sp. PCC 7822 plasmid Cy782201, complete sequencemulti-sensor signal transduction histidine kinase5e-0755.8
NC_017277:1957399:1979182197918219802881107Synechocystis sp. PCC 6803, complete genomehybrid sensory kinase Hik426e-0755.8
NC_017052:1957598:1979381197938119804871107Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehybrid sensory kinase Hik426e-0755.8
NC_017039:1957610:1979393197939319804991107Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehybrid sensory kinase Hik426e-0755.8
NC_013851:949973:9499739499739515921620Allochromatium vinosum DSM 180 chromosome, complete genomeresponse regulator receiver protein8e-0755.5
NC_004193:375416:621066621066621755690Oceanobacillus iheyensis HTE831, complete genometwo-component response regulator7e-0755.5
NC_009485:7021228:702547670254767025841366Bradyrhizobium sp. BTAi1 chromosome, complete genomeresponse regulator receiver, CheY17e-0755.5
NC_002936:149100:165258165258165956699Dehalococcoides ethenogenes 195, complete genomeDNA-binding response regulator7e-0755.5
NC_013165:647894:670076670076670804729Slackia heliotrinireducens DSM 20476, complete genomeresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain7e-0755.5
NC_020829:1307736:1309078130907813123173240Pseudomonas denitrificans ATCC 13867, complete genomeRcsC1e-0655.1
NC_014836:1180454:1191870119187011928981029Desulfurispirillum indicum S5 chromosome, complete genomeresponse regulator receiver9e-0755.1
NC_009850:1954969:197036719703671970738372Arcobacter butzleri RM4018, complete genomechemotaxis protein CheY9e-0755.1
NC_017187:1832045:184857518485751848946372Arcobacter butzleri ED-1, complete genomechemotaxis protein CheY1e-0654.7
NC_007413:2312735:233057223305722331300729Anabaena variabilis ATCC 29413, complete genomeTwo component Transcriptional regulator, Winged helix family1e-0654.3
NC_006576:2423250:2428600242860024298351236Synechococcus elongatus PCC 6301, complete genometwo-component response regulator1e-0654.3
NC_010475:2188827:2193624219362421956992076Synechococcus sp. PCC 7002, complete genometwo-component response regulator2e-0654.3
NC_021177:7870464:7884763788476378889084146Streptomyces fulvissimus DSM 40593, complete genomePAS/PAC sensor hybrid histidine kinase2e-0653.9
NC_010338:650054:673600673600673965366Caulobacter sp. K31, complete genomeresponse regulator receiver protein2e-0653.9
NC_007973:1785985:178744917874491788147699Ralstonia metallidurans CH34 chromosome 1, complete sequencetwo component transcriptional regulator, winged helix family2e-0653.9
NC_018012:1274500:1291798129179812933541557Thiocystis violascens DSM 198 chromosome, complete genomeresponse regulator containing a CheY-like receiver domain and a GGDEF domain2e-0653.9
NC_016818:1963875:198539419853941985783390Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains2e-0653.9
NC_020126:8080574:809522380952238095630408Myxococcus stipitatus DSM 14675, complete genomeresponse regulator2e-0653.9
NC_010001:3895264:3915499391549939171451647Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family3e-0653.5
NC_009089:370555:387054387054387755702Clostridium difficile 630, complete genometwo-component response regulator3e-0653.5
NC_014562:1772842:179854417985441798933390Pantoea vagans C9-1 chromosome, complete genomeChemotaxis protein cheY3e-0653.5
NC_007677:71532:8496684966873742409Salinibacter ruber DSM 13855, complete genomesensor histidine kinase with multiple PAS and a response regulator receiver domain2e-0653.5
NC_014032:71724:8514885148875562409Salinibacter ruber M8 chromosome, complete genometwo-component system sensor histidine kinase/response regulator, hybrid2e-0653.5
NC_015731:1731896:174481817448181745219402Nitrosomonas sp. Is79A3 chromosome, complete genomeresponse regulator receiver protein2e-0653.5
NC_016641:4011000:402209840220984022772675Paenibacillus terrae HPL-003 chromosome, complete genomewinged helix family two component transcriptional regulator4e-0653.1
NC_006576:2423250:2425794242579424286072814Synechococcus elongatus PCC 6301, complete genometwo-component system sensory histidine kinase3e-0653.1
NC_007604:1875268:1887216188721618884511236Synechococcus elongatus PCC 7942, complete genomeresponse regulator receiver domain protein (CheY-like)3e-0653.1
NC_008319:615135:633282633282634169888Synechococcus sp. CC9311, complete genometwo-component response regulator3e-0653.1
NC_007356:1221500:123230112323011232987687Dehalococcoides sp. CBDB1, complete genomeDNA-binding response regulator3e-0653.1
NC_007907:4692336:470383847038384704554717Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0652.8
NC_013316:371953:388451388451389185735Clostridium difficile R20291, complete genometwo-component response regulator5e-0652.8
NC_014815:3005970:302528430252843025736453Micromonospora sp. L5 chromosome, complete genomeresponse regulator receiver protein4e-0652.8
NC_008825:846916:8525408525408554672928Methylibium petroleiphilum PM1, complete genomeosmosensitive K+ channel histidine kinase-like protein4e-0652.8
NC_012470:678661:696442696442697164723Streptococcus equi subsp. zooepidemicus, complete genomealkaline phosphatase synthesis transcriptional regulatory protein4e-0652.8
NC_016627:3881000:389772938977293898424696Clostridium clariflavum DSM 19732 chromosome, complete genomeresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain7e-0652.4
NC_012472:2109719:213255221325522133235684Bacillus cereus 03BB102, complete genomeDNA-binding response regulator7e-0652.4
NC_013316:2033906:204692420469242047667744Clostridium difficile R20291, complete genometwo-component response regulator7e-0652.4
NC_007356:1165760:118627911862791186950672Dehalococcoides sp. CBDB1, complete genomeDNA-binding response regulator7e-0652.4
NC_012988:4353000:435604643560464356858813Methylobacterium extorquens DM4, complete genomeDNA-binding response regulator in two-component regulatory system with EnvZ6e-0652.4
NC_013510:5394432:5415681541568154194273747Thermomonospora curvata DSM 43183, complete genomemulti-sensor hybrid histidine kinase6e-0652.4
NC_004663:4928333:4938906493890649429074002Bacteroides thetaiotaomicron VPI-5482, complete genometwo-component system sensor histidine kinase/response regulator, hybrid ('one-component system')6e-0652.4
NC_014817:1063173:1076438107643810775861149Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceresponse regulator receiver sensor signal transduction histidine kinase6e-0652.4
NC_011831:1336779:135789813578981358608711Chloroflexus aggregans DSM 9485, complete genometwo component transcriptional regulator, winged helix family5e-0652.4
NC_015690:2553837:255315825531582553865708Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component response regulator5e-0652.4
NC_012559:2309566:232374123237412324148408Laribacter hongkongensis HLHK9, complete genomeCheY35e-0652.4
NC_007520:2391675:2399450239945024004961047Thiomicrospira crunogena XCL-2, complete genomeresponse regulator receiver (CheY-like) modulated metal dependent phosphohydrolase6e-0652.4
NC_019745:3066177:3069918306991830759025985Gloeocapsa sp. PCC 7428, complete genomemulti-sensor signal transduction histidine kinase6e-0652.4
NC_017267:2326443:234608423460842346476393Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetwo-component system response regulatory protein7e-0652
NC_016584:4860360:486399248639924864687696Desulfosporosinus orientis DSM 765 chromosome, complete genomeresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain7e-0652
NC_016935:4813916:4820630482063048221801551Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator8e-0652
NC_007952:1416000:143434114343411435012672Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein8e-0652
NC_017059:2084500:2086479208647920877051227Rhodospirillum photometricum DSM 122, complete genomeResponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain8e-0652