Pre_GI: BLASTP Hits

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Query: NC_008463:2467219:2489403 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 2489403, End: 2491613, Length: 2211

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012803:361127:3561023561023611305029Micrococcus luteus NCTC 2665, complete genome1e-1998.6
NC_013440:811780:8131298131298159062778Haliangium ochraceum DSM 14365, complete genome3'-5' exonuclease1e-55218
NC_013440:1624561:1625910162591016286872778Haliangium ochraceum DSM 14365, complete genome3'-5' exonuclease6e-56219
NC_013169:1845735:1845735184573518507174983Kytococcus sedentarius DSM 20547, complete genomeATP dependent helicase, Lhr family2e-1172
NC_015673:397947:4194264194264243844959Corynebacterium resistens DSM 45100 chromosome, complete genomeATP-dependent DNA helicase3e-24114
NC_007508:2941889:2959960295996029643544395Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeATP-dependent DNA helicase Lhr2e-22107
NC_009434:3611738:3745515374551537477342220Pseudomonas stutzeri A1501, complete genomeATP-dependent helicase01276
NC_014408:682689:6826896826896848212133Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent helicase2e-60234
NC_016612:28451:4061740617428152199Klebsiella oxytoca KCTC 1686 chromosome, complete genomeATP-dependent helicase2e-156553
NC_003888:7337453:7374208737420873764032196Streptomyces coelicolor A3(2), complete genomeATP-dependent helicase4e-43176
NC_016070:719791:7365697365697393162748Thermoproteus tenax Kra 1, complete genomeATP-dependent helicase7e-30132
NC_007493:1929000:1939988193998819421592172Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceATP-dependent helicase1e-156553
NC_009515:474285:4742854742854768852601Methanobrevibacter smithii ATCC 35061, complete genomeATP-dependent helicase1e-25119
NC_013967:1590500:1614465161446516168162352Haloferax volcanii DS2 chromosome, complete genomeATP-dependent helicase1e-1275.9
NC_015580:1584078:1597259159725915994332175Novosphingobium sp. PP1Y, complete genomeATP-dependent helicase Lhr and Lhr-like helicase1e-151536
NC_008095:7499255:7518954751895475215362583Myxococcus xanthus DK 1622, complete genomeATP-dependent helicase, DEAD/DEAH box family3e-1894
NC_008319:1306482:1316964131696413194142451Synechococcus sp. CC9311, complete genomeATP-dependent helicase, DEAD/DEAH box family protein1e-1895.9
NC_012440:423217:4245494245494269992451Persephonella marina EX-H1, complete genomeATP-dependent rna helicase, dead/deah box family2e-1068.2
NC_017047:2042346:2051482205148220536802199Rahnella aquatilis HX2 chromosome, complete genomeDEAD/DEAH box helicase2e-152540
NC_017275:1189162:1214566121456612173612796Sulfolobus islandicus HVE10/4 chromosome, complete genomeDEAD/DEAH box helicase2e-38161
NC_015151:1427965:1488726148872614915662841Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeDEAD/DEAH box helicase5e-33143
NC_007952:3196085:3218882321888232211132232Burkholderia xenovorans LB400 chromosome 2, complete sequenceDEAD/DEAH box helicase0803
NC_012918:1444333:1456652145665214588832232Geobacter sp. M21 chromosome, complete genomeDEAD/DEAH box helicase0690
NC_011663:1500772:1510636151063615119371302Shewanella baltica OS223 chromosome, complete genomeDEAD/DEAH box helicase1e-0862.8
NC_009656:4527457:4563274456327445654962223Pseudomonas aeruginosa PA7 chromosome, complete genomeDEAD/DEAH box helicase0972
NC_017954:301562:3015623015623043512790Thermogladius cellulolyticus 1633 chromosome, complete genomeDEAD/DEAH box helicase7e-30132
NC_009338:3359500:3386977338697733890672091Mycobacterium gilvum PYR-GCK chromosome, complete genomeDEAD/DEAH box helicase1e-40168
NC_010002:5691968:5700427570042757026492223Delftia acidovorans SPH-1, complete genomeDEAD/DEAH box helicase domain protein0734
NC_013440:1580802:1580802158080215829372136Haliangium ochraceum DSM 14365, complete genomeDEAD/DEAH box helicase domain protein8e-53209
NC_013510:1703464:1711029171102917131132085Thermomonospora curvata DSM 43183, complete genomeDEAD/DEAH box helicase domain protein5e-35150
NC_010525:1314999:1335599133559913384122814Thermoproteus neutrophilus V24Sta, complete genomeDEAD/DEAH box helicase domain protein8e-32139
NC_008435:2658986:2690170269017026924222253Rhodopseudomonas palustris BisA53, complete genomeDEAD/DEAH box helicase domain protein2e-144513
NC_008639:2545107:2552272255227225544042133Chlorobium phaeobacteroides DSM 266, complete genomeDEAD/DEAH box helicase domain protein1e-93345
NC_014910:1200605:1216539121653912187432205Alicycliphilus denitrificans BC chromosome, complete genomedead/deah box helicase domain protein0721
NC_014217:2020737:2030412203041220326552244Starkeya novella DSM 506 chromosome, complete genomeDEAD/DEAH box helicase domain protein2e-145516
NC_015172:850802:8538618538618560262166Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeDEAD/DEAH box helicase domain protein7e-94345
NC_013194:3861409:3869550386955038716852136Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeDEAD/DEAH box helicase domain protein4e-44180
NC_009776:157311:1651041651041679352832Ignicoccus hospitalis KIN4/I, complete genomeDEAD/DEAH box helicase domain protein2e-40168
NC_008757:151862:1707931707931728202028Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeDEAD/DEAH box helicase domain protein5e-37156
NC_013158:2303000:2319032231903223214012370Halorhabdus utahensis DSM 12940, complete genomeDEAD/DEAH box helicase domain protein1e-0862.8
NC_013158:1620761:1641383164138316437852403Halorhabdus utahensis DSM 12940, complete genomeDEAD/DEAH box helicase domain protein3e-0860.8
NC_011891:1278199:1298935129893513010402106Anaeromyxobacter dehalogenans 2CP-1, complete genomeDEAD/DEAH box helicase domain protein3e-56220
NC_014148:3959960:3979304397930439814242121Planctomyces limnophilus DSM 3776 chromosome, complete genomeDEAD/DEAH box helicase domain protein2e-51204
NC_013926:1166454:1168343116834311710152673Aciduliprofundum boonei T469 chromosome, complete genomeDEAD/DEAH box helicase domain protein5e-38160
NC_010525:1177154:1192683119268311954212739Thermoproteus neutrophilus V24Sta, complete genomeDEAD/DEAH box helicase domain protein8e-33142
NC_010001:902506:9154059154059195504146Clostridium phytofermentans ISDg, complete genomeDEAD/DEAH box helicase domain protein3e-24114
NC_014507:982000:9821929821929848792688Methanoplanus petrolearius DSM 11571 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein6e-32139
NC_014537:603564:6331606331606360602901Vulcanisaeta distributa DSM 14429 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-33144
NC_014160:801618:8016188016188044252808Thermosphaera aggregans DSM 11486 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein2e-23111
NC_009439:3770282:3781365378136537835812217Pseudomonas mendocina ymp, complete genomeDEAD/DEAH box helicase domain-containing protein01266
NC_013595:480000:4958494958494982962448Streptosporangium roseum DSM 43021, complete genomeDEAD/DEAH box helicase domain-containing protein2e-0861.6
NC_007513:987969:1002947100294710054212475Synechococcus sp. CC9902, complete genomeDEAD/DEAH box helicase-like1e-21105
NC_008312:5637974:5655409565540956581262718Trichodesmium erythraeum IMS101, complete genomeDEAD/DEAH box helicase-like1e-1172.4
NC_011004:2457778:246344924634492464042594Rhodopseudomonas palustris TIE-1, complete genomeDEAD/DEAH box helicase-like protein5e-0653.5
NC_007955:742834:7620857620857649192835Methanococcoides burtonii DSM 6242, complete genomeDEAD/DEAH box helicase-like protein9e-33142
NC_008391:404388:4208294208294253554527Burkholderia cepacia AMMD chromosome 2, complete sequenceDEAD/H associated domain protein2e-26121
NC_011891:4450031:4476352447635244806114260Anaeromyxobacter dehalogenans 2CP-1, complete genomeDEAD/H associated domain protein1e-22108
NC_011891:2088134:2088134208813420927444611Anaeromyxobacter dehalogenans 2CP-1, complete genomeDEAD/H associated domain protein6e-22106
NC_008536:3601841:3602640360264036072054566Solibacter usitatus Ellin6076, complete genomeDEAD/H associated domain protein3e-20100
NC_015562:1230532:1246389124638912505134125Methanotorris igneus Kol 5 chromosome, complete genomeDEAD/H associated domain-containing protein9e-1582.8
NC_016147:3349272:3363478336347833660302553Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeDistinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster9e-1169.3
NC_016010:65949:6594965949684442496Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeDistinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster5e-1170.5
NC_015723:1998363:1998363199836320010502688Cupriavidus necator N-1 chromosome 2, complete sequenceDNA ligase Lig3e-1894.4
NC_013172:2877722:2901164290116429036652502Brachybacterium faecium DSM 4810, complete genomehelicase family protein with metal-binding cysteine cluster3e-0964.3
NC_007333:810381:8285118285118306462136Thermobifida fusca YX, complete genomehelicase, C-terminal:DEAD/DEAH box helicase, N-terminal4e-42173
NC_007333:39579:7194471944741542211Thermobifida fusca YX, complete genomehelicase, C-terminal:DEAD/DEAH box helicase, N-terminal8e-157554
NC_006370:1810842:1829710182971018319082199Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical ATP-dependent helicase5e-143508
NC_007907:761486:7871527871527897192568Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0964.7
NC_007907:761486:7897497897497923852637Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0862
NC_007958:2370619:237593723759372376530594Rhodopseudomonas palustris BisB5, complete genomehypothetical protein1e-0758.9
NC_007907:761486:7848037848037869652163Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-96353
NC_015683:732668:7463117463117513205010Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein1e-28129
NC_012883:1283529:1301281130128113040312751Thermococcus sibiricus MM 739, complete genomeLarge helicase-related protein2e-29131
NC_000868:757823:7769427769427796802739Pyrococcus abyssi GE5, complete genomelarge helicase-related protein4e-33144
NC_006624:873525:8879228879228906992778Thermococcus kodakarensis KOD1, complete genomelarge helicase-related protein1e-31139
NC_016010:1822212:1842738184273818446961959Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeLhr-like helicase6e-173608
NC_019942:1211535:1211535121153512142072673Aciduliprofundum sp. MAR08-339, complete genomeLhr-like helicase2e-39164
NC_019792:3219333:3239661323966132425012841Natronobacterium gregoryi SP2 chromosome, complete genomeLhr-like helicase4e-35150
NC_021184:2936244:2936244293624429407404497Desulfotomaculum gibsoniae DSM 7213, complete genomeLhr-like helicase2e-1998.2
NC_007645:3581114:3587257358725735893562100Hahella chejuensis KCTC 2396, complete genomeLhr-like helicase8e-46185
NC_019942:1078837:1096394109639410979771584Aciduliprofundum sp. MAR08-339, complete genomeLhr-like helicase5e-22107
NC_013159:502928:5287135287135308212109Saccharomonospora viridis DSM 43017, complete genomeLhr-like helicase1e-33145
NC_004547:1837500:1842241184224118470374797Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable ATP-dependent helicase8e-26119
NC_012590:850130:8675268675268724694944Corynebacterium aurimucosum ATCC 700975, complete genomeputative ATP-dependent DNA helicase2e-22108
NC_007164:511171:5318585318585368524995Corynebacterium jeikeium K411, complete genomeputative ATP-dependent DNA helicase7e-28126
NC_016887:1949927:1974963197496319770952133Nocardia cyriacigeorgica GUH-2, complete genomeputative ATP-dependent helicase5e-45183
NC_009142:5698100:5714083571408357163772295Saccharopolyspora erythraea NRRL 2338, complete genomeputative ATP-dependent helicase1e-45185
NC_000854:1342983:1354540135454013572452706Aeropyrum pernix K1, complete genomeputative ATP-dependent helicase2e-24115
NC_002935:781172:7993437993438041574815Corynebacterium diphtheriae NCTC 13129, complete genomePutative ATP-dependent helicase3e-25117
NC_017075:1869326:1869326186932618715332208Rubrivivax gelatinosus IL144, complete genomeputative ATP-dependent helicase0724
NC_010572:1872840:1898715189871519008532139Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ATP-dependent helicase2e-44181
NC_007508:64955:6641566415689102496Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative helicase4e-1170.5
NC_013741:1390823:1408399140839914125114113Archaeoglobus profundus DSM 5631, complete genometranscriptional regulator, XRE family1e-1379