Pre_GI: BLASTP Hits

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Query: NC_008463:1756434:1772027 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1772027, End: 1772617, Length: 591

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:1811874:182826018282601828850591Pseudomonas aeruginosa LESB58, complete genomealiphatic amidase regulator3e-108390
NC_015563:3571682:357834035783403579029690Delftia sp. Cs1-4 chromosome, complete genomeANTAR domain-containing protein8e-24110
NC_010002:3980832:399548239954823996171690Delftia acidovorans SPH-1, complete genomeresponse regulator receiver and ANTAR domain protein9e-24109
NC_020908:5047410:505940350594035059963561Octadecabacter arcticus 238, complete genomealiphatic amidase regulator2e-21102
NC_015556:4025559:404105440410544041656603Pseudomonas fulva 12-X chromosome, complete genomeANTAR domain protein with unknown sensor9e-2096.7
NC_010505:4676403:469802046980204698646627Methylobacterium radiotolerans JCM 2831, complete genomeresponse regulator receiver and ANTAR domain protein2e-1272
NC_012988:4292815:432668343266834327192510Methylobacterium extorquens DM4, complete genomealiphatic amidase regulator, AmiR2e-0859.3
NC_016584:1998000:202019920201992020765567Desulfosporosinus orientis DSM 765 chromosome, complete genomeresponse regulator with putative antiterminator output domain3e-0755.1
NC_009633:3429972:344351634435163444088573Alkaliphilus metalliredigens QYMF chromosome, complete genomeresponse regulator receiver/ANTAR domain-containing protein1e-0653.1
NC_018870:705900:721403721403721999597Thermacetogenium phaeum DSM 12270 chromosome, complete genometranscriptional regulatory protein3e-0652
NC_013124:1107202:112593511259351126546612Acidimicrobium ferrooxidans DSM 10331, complete genomeresponse regulator receiver and ANTAR domain protein9e-0650.1