Pre_GI: BLASTP Hits

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Query: NC_008463:1756434:1770873 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1770873, End: 1772030, Length: 1158

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:1811874:1827106182710618282631158Pseudomonas aeruginosa LESB58, complete genomealiphatic amidase expression-regulating protein0781
NC_015138:4205986:4205986420598642071311146Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeextracellular ligand-binding receptor1e-93343
NC_020908:5047410:5058198505819850593521155Octadecabacter arcticus 238, complete genomealiphatic amidase expression-regulating protein5e-93341
NC_010002:3980832:3996174399617439973221149Delftia acidovorans SPH-1, complete genomeABC branched chain amino acid family transporter, periplasmic ligand binding protein1e-83310
NC_015563:3571682:3577189357718935783371149Delftia sp. Cs1-4 chromosome, complete genomeextracellular ligand-binding receptor1e-83310
NC_015556:4025559:4039913403991340410371125Pseudomonas fulva 12-X chromosome, complete genomeABC-type branched-chain amino acid transport systems periplasmic component-like protein5e-78291
NC_010505:4676403:4696869469686946980231155Methylobacterium radiotolerans JCM 2831, complete genomeputative amidase expression-regulating protein2e-70266
NC_012988:4292815:4327289432728943283681080Methylobacterium extorquens DM4, complete genomealiphatic amidase expression-regulating protein, AmiC3e-64246
NC_009437:2579161:2621677262167726229241248Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular ligand-binding receptor6e-59228
NC_014828:2497462:2506564250656425077631200Ethanoligenens harbinense YUAN-3 chromosome, complete genomeExtracellular ligand-binding receptor3e-58226
NC_014828:2497462:2514413251441325156571245Ethanoligenens harbinense YUAN-3 chromosome, complete genomeABC transporter, periplasmic solute-binding protein, putative2e-56219
NC_015681:1201926:1211035121103512123031269Thermodesulfatator indicus DSM 15286 chromosome, complete genomeurea ABC transporter, urea binding protein2e-54213
NC_011757:1553500:1560502156050215618121311Methylobacterium chloromethanicum CM4, complete genomeputative substrate-binding component of ABC transporter1e-50201
NC_012988:1817000:1824043182404318253291287Methylobacterium extorquens DM4, complete genomealiphatic amidase expression-regulating protein , amiC1e-50200
NC_020908:5047410:5051128505112850523781251Octadecabacter arcticus 238, complete genomeputative aliphatic amidase expression-regulating protein7e-50198
NC_006361:5546232:5555078555507855563521275Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-49197
NC_004113:1137754:1151497115149711528101314Thermosynechococcus elongatus BP-1, complete genomeABC transporter substrate-binding protein4e-49195
NC_004369:1051013:1060725106072510619781254Corynebacterium efficiens YS-314, complete genomeputative ABC transporter substrate-binding protein3e-48192
NC_013894:672840:6870666870666882801215Thermocrinis albus DSM 14484 chromosome, complete genomeurea ABC transporter, urea binding protein4e-48192
NC_008800:3123495:3125172312517231264401269Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative substrate-binding periplasmic transport protein3e-43176
NC_015224:1641819:1660245166024516615131269Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative substrate-binding periplasmic transport protein4e-43175
NC_010475:420978:4209784209784222941317Synechococcus sp. PCC 7002, complete genomeABC transporter, branched-chain amino acid transport, periplasmic binding protein1e-42174
NC_007516:2420264:2432101243210124333991299Synechococcus sp. CC9605, complete genomeputative urea ABC transporter, substrate binding protein2e-41170
NC_010995:1101614:1123276112327611244721197Cellvibrio japonicus Ueda107, complete genomeamide-urea binding protein5e-41168
NC_008781:1038158:1049613104961310508961284Polaromonas naphthalenivorans CJ2, complete genometwin-arginine translocation pathway signal7e-41168
NC_013209:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-01, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_017100:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-03, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_017108:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-12, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_017111:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-32, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_017121:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-07, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_017125:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-22, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_017146:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-26, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_017150:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-01-42C, complete genomeamide-urea transporter substrate-binding periplasmic protein1e-39164
NC_008343:2050000:2066710206671020679931284Granulibacter bethesdensis CGDNIH1, complete genomeamide-urea binding protein2e-39163
NC_016825:158626:1663751663751675411167Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12twin-arginine translocation pathway signal3e-39162
NC_007952:1453000:1477605147760514788701266Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein5e-39162
NC_009074:2970435:3008433300843330097401308Burkholderia pseudomallei 668 chromosome I, complete sequenceputative amino acid ABC transporter, periplasmic amino acid-binding protein2e-38160
NC_013422:1732677:1738955173895517401991245Halothiobacillus neapolitanus c2, complete genomeurea ABC transporter, urea binding protein4e-38159
NC_018691:761560:7768057768057781031299Alcanivorax dieselolei B5 chromosome, complete genomeBranched-chain amino acid ABC transporter, putative4e-38159
NC_010084:2674972:2696485269648526977921308Burkholderia multivorans ATCC 17616 chromosome 1, completeurea ABC transporter urea binding protein3e-38159
NC_005070:334952:3673363673363686161281Synechococcus sp. WH 8102, complete genomeputative urea binding protein1e-37157
NC_003911:1791878:1827788182778818291221335Silicibacter pomeroyi DSS-3, complete genomebranched-chain amino acid ABC transporter, periplasmic substrate-binding protein1e-35150
NC_017506:2993679:3017402301740230186911290Marinobacter adhaerens HP15 chromosome, complete genomeurea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein3e-35149
NC_012997:4621764:4640752464075246420501299Teredinibacter turnerae T7901, complete genomeurea ABC transporter, urea binding protein7e-33141
NC_012880:913698:9164499164499176931245Dickeya dadantii Ech703, complete genomeExtracellular ligand-binding receptor4e-32139
NC_020453:3179346:3179346317934631805841239Agromonas oligotrophica S58 DNA, complete genomealiphatic amidase expression-regulating protein1e-29130
NC_008576:3331825:3339175333917533425313357Magnetococcus sp. MC-1, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-25117
NC_015723:1448000:1454414145441414555351122Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein3e-22106
NC_015556:4025559:4033832403383240350701239Pseudomonas fulva 12-X chromosome, complete genomebranched chain amino-acid ABC transporter substrate-binding protein5e-21102
NC_008212:2978786:2994180299418029954721293Haloquadratum walsbyi DSM 16790, complete genomeABC-type urea transport systems,substrate-binding protein2e-20100
NC_010505:4676403:4699711469971147008651155Methylobacterium radiotolerans JCM 2831, complete genomeExtracellular ligand-binding receptor1e-1894.7
NC_012988:4292815:4316974431697443181311158Methylobacterium extorquens DM4, complete genomeextracellular ligand-binding receptor2e-1893.6
NC_011001:302500:3173093173093184871179Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein2e-1686.7
NC_010515:1205258:1216482121648212176601179Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein3e-1686.7
NC_016906:839406:8444918444918458761386Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein1e-1481.3
NC_017059:2084500:2097334209733420988571524Rhodospirillum photometricum DSM 122, complete genomeTwin-arginine translocation pathway signal2e-1480.1
NC_015312:6357469:6360162636016263612321071Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeregulatory protein3e-1376.6
NC_014540:1835493:1839220183922018404281209Burkholderia sp. CCGE1003 chromosome 2, complete sequenceextracellular ligand-binding receptor3e-1376.3
NC_009937:5033152:5040446504044650416151170Azorhizobium caulinodans ORS 571, complete genomeputative substrate-binding protein1e-1171.2
NC_014974:1076565:1094174109417410953641191Thermus scotoductus SA-01 chromosome, complete genomeextracellular ligand-binding receptor1e-1068.2
NC_016585:1004000:1019348101934810205441197Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencebranched chain amino acid ABC transporter substrate-binding protein4e-1066.2
NC_010170:1219641:1241603124160312428051203Bordetella petrii, complete genomeputative Substrate-binding periplasmic protein4e-1065.9
NC_012587:3613162:3635526363552636367191194Rhizobium sp. NGR234, complete genomeputative extracellular ligand-binding receptor1e-0964.7
NC_016147:3023180:3043998304399830451161119Pseudoxanthomonas spadix BD-a59 chromosome, complete genometwin-arginine translocation pathway signal9e-0961.6
NC_011979:3045952:3068002306800230691411140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor1e-0861.2
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family2e-0860.5
NC_014391:4644500:4645341464534146466811341Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeextracellular ligand-binding receptor4e-0859.7
NC_010170:4739925:4743625474362547448961272Bordetella petrii, complete genomeABC transporter substrate-binding protein6e-0858.9
NC_015727:1294532:1319872131987213210951224Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter substrate-binding protein9e-0858.5
NC_011979:3045952:3066827306682730679661140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor1e-0757.8
NC_012658:545840:5468995468995480411143Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein2e-0757.4
NC_015458:3077804:3097937309793730991391203Pusillimonas sp. T7-7 chromosome, complete genomeextracellular ligand-binding receptor3e-0756.6
NC_008786:1507139:1526660152666015278381179Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor7e-0755.5
NC_010511:637214:6536716536716549121242Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor1e-0654.7
NC_009720:464078:4676714676714690081338Xanthobacter autotrophicus Py2, complete genomeextracellular ligand-binding receptor1e-0654.3
NC_008786:5128363:5138340513834051394941155Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor2e-0653.9
NC_009617:3184924:3218440321844032196211182Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular ligand-binding receptor3e-0653.1