Pre_GI: BLASTP Hits

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Query: NC_008463:1293079:1317148 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1317148, End: 1317348, Length: 201

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:2683989:269945626994562699656201Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA3e-32137
NC_002928:1351750:135796613579661358127162Bordetella parapertussis 12822, complete genomehypothetical protein1e-22104
NC_015422:1876102:189556018955601895760201Alicycliphilus denitrificans K601 chromosome, complete genomeexcisionase family DNA binding domain-containing protein3e-22103
NC_010084:2484000:249887624988762499157282Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA binding domain-containing protein1e-1685.1
NC_010804:996837:102561610256161025897282Burkholderia multivorans ATCC 17616 chromosome 1, completeputative excisionase1e-1685.1
NC_016616:1534983:155261115526111552883273Dechlorosoma suillum PS chromosome, complete genomeexcisionase family DNA-binding2e-1684.3
NC_020260:882307:910527910527910808282Cronobacter sakazakii Sp291, complete genomephage transcriptional regulator9e-1579
NC_014366:478000:491210491210491434225Gamma proteobacterium HdN1, complete genomeExcisionase, phage related3e-1373.9
NC_009052:5089963:509377650937765094000225Shewanella baltica OS155, complete genomeputative transcriptional regulator4e-1373.6
NC_008752:166877:171086171086171298213Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA binding domain, excisionase family4e-1373.2
NC_005139:2201820:222056022205602220736177Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein1e-1271.6
NC_016112:364723:368711368711368905195Methylomicrobium alcaliphilum chromosome, complete genomeexcisionase4e-1270.1
NC_015186:491930:512700512700512894195Acidiphilium multivorum AIU301, complete genomehypothetical protein5e-1269.7
NC_011662:1041725:104648610464861046695210Thauera sp. MZ1T, complete genomeexcision promoter, Xis7e-1269.3
NC_007645:3581114:360687036068703607079210Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator8e-1268.9
NC_015500:1923514:196319519631951963845651Treponema brennaborense DSM 12168 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN4e-1166.6
NC_009455:173374:191300191300191470171Dehalococcoides sp. BAV1 chromosome, complete genome2e-0961.2
NC_008578:889907:895710895710895892183Acidothermus cellulolyticus 11B, complete genomeDNA binding domain, excisionase family1e-0858.2
NC_014314:238043:278609278609279148540Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeresponse regulator receiver protein3e-0857.4
NC_014844:1773424:178791317879131788101189Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein4e-0857
NC_013890:191616:202464202464202646183Dehalococcoides sp. GT chromosome, complete genomeDNA binding domain protein, excisionase family9e-0855.8
NC_014484:447889:449153449153449854702Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-0652
NC_016620:781995:793788793788793967180Bacteriovorax marinus SJ, complete genomehypothetical protein1e-0651.6
NC_009656:3817261:3830088383008838321182031Pseudomonas aeruginosa PA7 chromosome, complete genomeputative helicase3e-0650.4
NC_009446:174951:200173200173200376204Dichelobacter nodosus VCS1703A, complete genomehypothetical protein4e-0650.4
NC_014844:1818939:182188718218871822090204Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein4e-0650.4
NC_017082:5925357:592773959277395928632894Bradyrhizobium sp. S23321, complete genomehypothetical protein7e-0649.3