Pre_GI: BLASTP Hits

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Query: NC_008435:4530797:4542885 Rhodopseudomonas palustris BisA53, complete genome

Start: 4542885, End: 4544633, Length: 1749

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:1178500:1185994118599411877451752Klebsiella pneumoniae 342 chromosome, complete genomeOLD family TOPRIM nucleotidyl transferase/hydrolase domain protein0714
NC_020181:5130513:5143737514373751454881752Enterobacter aerogenes EA1509E, complete genomeATP-dependent endonuclease of the OLD family-like protein0713
NC_007760:3655433:3677752367775236795991848Anaeromyxobacter dehalogenans 2CP-C, complete genomeATP-dependent endonuclease of the OLD family-like8e-103374
NC_016887:3201976:3214002321400232158101809Nocardia cyriacigeorgica GUH-2, complete genomeputative ATP-dependent endonuclease of the OLD family-like protein8e-83308
NC_003306:22228:2442824428261611734Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein4e-51203
NC_003064:22535:2460024600264681869Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein4e-51202
NC_012691:1743038:1778403177840317803551953Tolumonas auensis DSM 9187, complete genomeRecF/RecN/SMC N domain protein2e-45184
NC_007760:3735749:3744893374489337471692277Anaeromyxobacter dehalogenans 2CP-C, complete genomeOLD family-like ATP-dependent endonuclease2e-45184
NC_011740:2859933:2868232286823228702802049Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-44181
NC_009659:1129066:1158048115804811598651818Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein4e-40166
NC_015416:621513:6320776320776339181842Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein1e-38161
NC_021184:1484352:1502760150276015045771818Desulfotomaculum gibsoniae DSM 7213, complete genomeputative ATP-dependent endonuclease of the OLD family3e-35150
NC_003919:4618988:4636552463655246382341683Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein5e-34146
NC_012691:2614603:2652902265290226546891788Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-32140
NC_011768:79297:8994689946919612016Desulfatibacillum alkenivorans AK-01, complete genomeSMC domain protein2e-31137
NC_009138:1974935:2008206200820620099901785Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-31137
NC_014507:906960:9169179169179188451929Methanoplanus petrolearius DSM 11571 chromosome, complete genomeSMC domain-containing protein3e-31137
NC_018868:619113:6601256601256620771953Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein8e-31135
NC_007925:3933765:3937108393710839391952088Rhodopseudomonas palustris BisB18, complete genomeSMC protein-like9e-31135
NC_020260:603796:6273036273036287601458Cronobacter sakazakii Sp291, complete genomehypothetical protein9e-30132
NC_016609:2150863:2167046216704621689921947Niastella koreensis GR20-10 chromosome, complete genomeATP-dependent OLD family endonuclease6e-30132
NC_010465:3431500:3435097343509734371452049Yersinia pseudotuberculosis YPIII, complete genomeSMC (structural maintenance of chromosomes) family protein4e-29129
NC_013850:1753716:1761023176102317628071785Klebsiella variicola At-22 chromosome, complete genomehypothetical protein7e-29129
NC_017082:6321124:6328590632859063306292040Bradyrhizobium sp. S23321, complete genomeATP-dependent OLD family endonuclease8e-29129
NC_010688:2781624:2832215283221528340021788Xanthomonas campestris pv. campestris, complete genomeHypothetical protein ybjD.2e-28127
NC_007951:2087385:2102514210251421043551842Burkholderia xenovorans LB400 chromosome 1, complete sequencePredicted ATP-dependent endonuclease of the OLD family2e-27124
NC_013421:1780722:1780722178072217825121791Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-27122
NC_016943:21364:2534925349270461698Blastococcus saxobsidens DD2, complete genomeputative exonuclease3e-26120
NC_016817:185000:2021482021482033381191Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequenceSMC (structural maintenance of chromosomes) family protein1e-25118
NC_008781:1038158:1047602104760210495151914Polaromonas naphthalenivorans CJ2, complete genomeATP-dependent endonuclease of the OLD family2e-25118
NC_009075:15017:2882528825306091785Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein4e-25116
NC_014311:3076519:3095153309515330969521800Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-24114
NC_007974:2048000:2083641208364120854371797Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative exonuclease2e-23110
NS_000195:526983:5434625434625453511890Candidatus Cloacamonas acidaminovoranshypothetical protein2e-20101
NC_015660:3328595:3345598334559833475441947Geobacillus thermoglucosidasius C56-YS93 chromosome, completeSMC domain-containing protein2e-1894.4
NC_007907:5185510:5270756527075652728822127Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1894
NC_018645:3029785:3038101303810130402422142Desulfobacula toluolica Tol2, complete genomeDNA replication and repair protein, relted to recF8e-1892.4
NC_003552:2634828:2644101264410126461702070Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-1791.3
NC_013198:394000:4536564536564557462091Lactobacillus rhamnosus GG, complete genomepredicted ORF3e-1790.5
NC_013132:5250385:5272842527284252751842343Chitinophaga pinensis DSM 2588, complete genomeATP-dependent endonuclease, OLD family3e-1790.5
NC_017030:9818064:9827517982751798295202004Corallococcus coralloides DSM 2259 chromosome, complete genomeATP-dependent OLD family endonuclease5e-1583.2
NC_010322:4623867:4639471463947146411951725Pseudomonas putida GB-1 chromosome, complete genomeSMC domain-containing protein1e-1482
NC_008609:1976403:2015460201546020175712112Pelobacter propionicus DSM 2379, complete genomehypothetical protein2e-1481.3
NC_008542:197500:2275572275572296262070Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceATP-dependent endonuclease of the OLD family-like protein4e-1480.1
NC_018866:1328623:1339251133925113413712121Dehalobacter sp. DCA chromosome, complete genomehypothetical protein7e-1479.3
NC_017187:1564403:1579166157916615808781713Arcobacter butzleri ED-1, complete genomeputative endonuclease2e-1378.2
NC_009792:3665369:3676649367664936787842136Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1377.4
NC_010338:4108280:4127866412786641299412076Caulobacter sp. K31, complete genomeconserved hypothetical membrane spanning protein3e-1377
NC_008752:725189:7360817360817382192139Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein8e-1375.9
NC_016902:44744:5839258392600921701Escherichia coli KO11FL chromosome, complete genomeSMC domain-containing protein9e-1375.9
CP002185:4035502:4045981404598140476811701Escherichia coli W, complete genomehypothetical protein9e-1375.9
CP002516:44744:5839258392600921701Escherichia coli KO11, complete genomeSMC domain-containing protein9e-1375.9
NC_009441:4328035:4346439434643943488202382Flavobacterium johnsoniae UW101 chromosome, complete genomeATP-dependent OLD family endonuclease1e-1275.1
NC_015177:1822000:1839871183987118420122142Pedobacter saltans DSM 12145 chromosome, complete genomeSMC domain protein2e-1171.6
NC_007929:1637261:1647690164769016497292040Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein2e-1171.2
NC_009076:3765441:3791874379187437935141641Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein3e-1170.9
NC_015138:2069739:2080545208054520829532409Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein4e-1170.1
NC_011206:262844:2789572789572812782322Acidithiobacillus ferrooxidans ATCC 53993, complete genomeATP-dependent endonuclease, OLD family5e-1169.7
NC_011901:2983555:2988278298827829903022025Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent OLD family endonuclease7e-1169.3
NC_008463:5313527:5348012534801253504352424Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-1067.8
NC_015422:2806832:2827485282748528295092025Alicycliphilus denitrificans K601 chromosome, complete genomeATP-dependent OLD family endonuclease2e-1067.8
NC_015379:908904:9647329647329669302199Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-1066.6
NC_002516:2113186:2120225212022521222221998Pseudomonas aeruginosa PAO1, complete genomehypothetical protein5e-1066.6
NC_014618:690056:7142527142527165672316Enterobacter cloacae SCF1 chromosome, complete genomeATP-dependent endonuclease9e-1065.9
NC_013131:7945280:7983002798300279850112010Catenulispora acidiphila DSM 44928, complete genomeATP-dependent OLD family endonuclease9e-1065.9
NC_013456:1843000:1849597184959718517412145Vibrio sp. Ex25 chromosome 1, complete genomepathogenesis related protein1e-0965.5
NC_019904:5308998:5319280531928053213012022Echinicola vietnamensis DSM 17526 chromosome, complete genomeOLD family ATP-dependent endonuclease1e-0965.1
NC_014803:709000:7142497142497160841836Pseudoalteromonas sp. SM9913 chromosome chromosome I, completehypothetical protein2e-0964.7
NC_007946:289425:2996222996223017692148Escherichia coli UTI89, complete genomehypothetical protein6e-0963.2
NC_015733:3736104:3759442375944237617392298Pseudomonas putida S16 chromosome, complete genomehypothetical protein7e-0962.8
NC_014974:404015:4173414173414189271587Thermus scotoductus SA-01 chromosome, complete genomeputative ATP-dependent endonuclease of the OLD family1e-0862.4
NC_007651:3064530:3116914311691431192682355Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein2e-0861.6
NC_017188:3839478:3851073385107338531782106Bacillus amyloliquefaciens TA208 chromosome, complete genometopoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase2e-0861.6
NC_017190:3879148:3910644391064439128152172Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein1e-0861.6
NC_017191:3841170:3852765385276538549362172Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein1e-0861.6
NC_007951:2904644:2921660292166029240082349Burkholderia xenovorans LB400 chromosome 1, complete sequencePredicted ATP-dependent endonuclease, OLD family2e-0861.2
NC_015730:1918000:1924944192494419271842241Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein6e-0859.7
NC_004578:20738:6207862078640631986Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-0757.4
NC_008686:1383891:1409683140968314119172235Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein3e-0757
NC_018750:6132619:6135635613563561374731839Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-0654.3
NC_020211:3535622:3547799354779935496611863Serratia marcescens WW4, complete genomehypothetical protein3e-0654.3
NC_015684:362236:3622363622363640831848Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein4e-0653.5
NC_011386:136223:1646261646261664731848Oligotropha carboxidovorans OM5, complete genomeATP-dependent endonuclease family protein4e-0653.5