Pre_GI: BLASTP Hits

Some Help

Query: NC_008435:1215437:1221109 Rhodopseudomonas palustris BisA53, complete genome

Start: 1221109, End: 1222656, Length: 1548

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008760:27967:2796727967300362070Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, completeRecombinase0724
NC_015730:3693391:3694061369406136961452085Roseobacter litoralis Och 149 chromosome, complete genomeputative resolvase/recombinase2e-173609
NC_015730:3662934:3678402367840236804862085Roseobacter litoralis Och 149 chromosome, complete genomeputative resolvase/recombinase2e-173609
NC_016588:133943:1412191412191433092091Azospirillum lipoferum 4B plasmid AZO_p6, complete sequenceputative resolvase1e-105384
NC_013856:692000:6945656945656966552091Azospirillum sp. B510 plasmid pAB510b, complete sequencetransposase2e-105383
NC_013860:171235:1904221904221925122091Azospirillum sp. B510 plasmid pAB510f, complete sequenceresolvase2e-105383
NC_013193:38918:5955059550616282079Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmidhypothetical protein1e-82307
NC_013194:69634:9616196161982392079Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeResolvase domain protein2e-82306
NC_012586:897148:9182429182429203262085Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase number 4 for insertion sequence NGRIS-4f3e-81303
NC_012587:2326000:2327063232706323291472085Rhizobium sp. NGR234, complete genomeputative transposase number 4 for insertions sequence NGRIS-4c3e-81303
NC_002678:4885790:4888299488829948903772079Mesorhizobium loti MAFF303099, complete genometransposase8e-79295
NC_010623:1871492:1924327192432719264112085Burkholderia phymatum STM815 chromosome 2, complete sequenceResolvase domain protein5e-78291
NC_010623:1961685:1980730198073019828142085Burkholderia phymatum STM815 chromosome 2, complete sequenceResolvase domain protein5e-78291
NC_010162:5631325:5641297564129756434172121Sorangium cellulosum 'So ce 56', complete genomerecombinase1e-77290
NC_011987:53760:7756677566796832118Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencetransposase1e-71271
NC_009921:522000:5417775417775439452169Frankia sp. EAN1pec, complete genomeResolvase domain2e-67256
NC_009921:8215996:8248683824868382506531971Frankia sp. EAN1pec, complete genomeResolvase domain2e-66253
NC_019892:2816549:2830130283013028323342205Singulisphaera acidiphila DSM 18658 chromosome, complete genomesite-specific recombinase, DNA invertase Pin2e-65250
NC_008278:5012000:5017819501781950198612043Frankia alni ACN14a, complete genomePutative transposase.3e-64246
NC_013216:3473119:3484011348401134857501740Desulfotomaculum acetoxidans DSM 771, complete genomeresolvase domain-containing protein2e-46187
NC_015957:196000:209711209711210172462Streptomyces violaceusniger Tu 4113 chromosome, complete genomeResolvase domain-containing protein4e-1893.2
NC_007644:1603696:1603696160369616053361641Moorella thermoacetica ATCC 39073, complete genomeResolvase-like2e-1687.4
NC_014722:1191380:1200152120015212012251074Burkholderia rhizoxinica HKI 454, complete genomesite-specific DNA recombinase2e-1584.7
NC_010125:1051735:106814810681481068486339Gluconacetobacter diazotrophicus PAl 5, complete genome6e-1582.8
NC_014365:2037506:2051634205163420532201587Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein6e-1479.3
NC_009089:581655:6044276044276060281602Clostridium difficile 630, complete genomeconjugative transposon site-specific recombinase3e-1377
NC_017179:2067015:2067015206701520686131599Clostridium difficile BI1, complete genomesite-specific recombinases1e-1275.1
NC_013315:2059007:2059007205900720606051599Clostridium difficile CD196 chromosome, complete genomesite-specific recombinases1e-1275.1
NC_011666:1572487:158005415800541580266213Methylocella silvestris BL2, complete genome3e-1273.9
NC_016048:1694631:1699313169931317010041692Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase2e-1273.9
NC_017353:887581:8875818875818889631383Staphylococcus lugdunensis N920143, complete genomesite-specific recombinase5e-1169.7
NC_008699:1132790:1150783115078311521801398Nocardioides sp. JS614, complete genomeRecombinase1e-1068.6
NC_004463:2118000:2120576212057621223331758Bradyrhizobium japonicum USDA 110, complete genomeDNA invertase3e-1067.4
NC_014034:2899120:2911608291160829129331326Rhodobacter capsulatus SB1003 chromosome, complete genomeresolvase family protein3e-1067.4
NC_004757:2730057:2780172278017227815271356Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase3e-1067.4
NC_009495:2479465:2521384252138425230031620Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeresolvase3e-1067
NC_009089:3935500:3938102393810239398621761Clostridium difficile 630, complete genomeputative conjugative transposon recombinase5e-1066.2
NC_014366:2826575:2833647283364728350021356Gamma proteobacterium HdN1, complete genomePredicted site-specific recombinase6e-1066.2
NC_013729:5982000:5988854598885459902331380Kribbella flavida DSM 17836, complete genomeRecombinase7e-1065.9
NC_015422:2078618:2093031209303120944101380Alicycliphilus denitrificans K601 chromosome, complete genomeresolvase domain-containing protein1e-0965.1
NC_011386:763111:7778747778747791811308Oligotropha carboxidovorans OM5, complete genomeresolvase1e-0964.7
NC_015684:3340519:3345276334527633465831308Oligotropha carboxidovorans OM5 chromosome, complete genomesite-specific recombinases/DNA1e-0964.7
NC_013316:2033906:2043677204367720455571881Clostridium difficile R20291, complete genomesite-specific recombinase, resolvase family, putative2e-0964.7
NC_009256:3601080:3609737360973736111851449Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein2e-0964.3
NC_013440:1580802:1592997159299715946011605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein2e-0964.3
NC_013440:1317982:1320107132010713217111605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein2e-0963.9
NC_015977:2309873:2331366233136623330421677Roseburia hominis A2-183 chromosome, complete genomesite-specific recombinase4e-0963.5
NC_010003:449192:4623954623954639631569Petrotoga mobilis SJ95, complete genomeResolvase domain4e-0963.2
NC_015977:3324000:3328809332880933306891881Roseburia hominis A2-183 chromosome, complete genomesite-specific recombinase, resolvase family protein5e-0963.2
NC_003295:3421520:3430395343039534317831389Ralstonia solanacearum GMI1000, complete genomePUTATIVE SITE-SPECIFIC INTEGRASE/RESOLVASE PROTEIN7e-0962.8
NC_013316:2033906:2085969208596920876391671Clostridium difficile R20291, complete genomehypothetical protein5e-0962.8
NC_008347:174000:1810061810061826431638Maricaulis maris MCS10, complete genomeRecombinase9e-0962
NC_016026:1969766:1975530197553019771401611Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeresolvase, N terminal domain-containing protein9e-0962
NC_013440:1131376:1154285115428511558891605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein1e-0862
NC_006510:887545:8999548999549014261473Geobacillus kaustophilus HTA426, complete genomesite-specific recombinase (resolvase family)1e-0861.6
NC_014365:2843126:2857047285704728586061560Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein1e-0861.6
NC_007645:5801295:5813910581391058152651356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase2e-0861.2
NC_016627:4323370:4329798432979843313661569Clostridium clariflavum DSM 19732 chromosome, complete genomesite-specific recombinase, DNA invertase Pin2e-0860.8
NC_016627:4270949:4290346429034642919141569Clostridium clariflavum DSM 19732 chromosome, complete genomesite-specific recombinase, DNA invertase Pin2e-0860.8
NC_014311:198542:2098252098252112131389Ralstonia solanacearum PSI07 chromosome, complete genomesite-specific resolvase protein3e-0860.8
NC_009012:1934107:1938931193893119404991569Clostridium thermocellum ATCC 27405, complete genomeRecombinase3e-0860.5
NC_015977:2874000:2893300289330028949851686Roseburia hominis A2-183 chromosome, complete genomesite-specific recombinase4e-0860.1
NC_004461:1:4244142441440691629Staphylococcus epidermidis ATCC 12228, complete genomecassette chromosome recombinase B5e-0859.7
NC_013316:2033906:2066666206666620683181653Clostridium difficile R20291, complete genomehypothetical protein7e-0859.3
NC_003295:921256:9375829375829389641383Ralstonia solanacearum GMI1000, complete genomePUTATIVE SITE-SPECIFIC INTEGRASE/RECOMBINASE PROTEIN1e-0758.9
NC_015977:2309873:2337782233778223394731692Roseburia hominis A2-183 chromosome, complete genomeconjugative transposon recombinase9e-0858.9
NC_002967:2194829:2204491220449122063291839Treponema denticola ATCC 35405, complete genomesite-specific recombinase, putative8e-0858.9
NC_007645:5724000:5743484574348457448391356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase1e-0758.5
NC_008686:2080770:2081476208147620828011326Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRecombinase1e-0758.2
NC_014376:3732547:3765066376506637667331668Clostridium saccharolyticum WM1 chromosome, complete genomeRecombinase2e-0757.8
NC_013165:2240377:2265193226519322668121620Slackia heliotrinireducens DSM 20476, complete genomesite-specific recombinase, DNA invertase Pin3e-0757.4
NC_011894:7421867:742715374271537428040888Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein3e-0757
NC_014410:800500:8335678335678351351569Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Resolvase domain3e-0757
NC_012781:3315614:3353118335311833547281611Eubacterium rectale ATCC 33656, complete genomesite-specific recombinase3e-0757
NC_010943:1938136:1942507194250719438771371Stenotrophomonas maltophilia K279a, complete genomeputative recombinase/resolvase6e-0756.2
NC_013722:2810721:2842626284262628440141389Xanthomonas albilineans, complete genomeputative site-specific integrase protein8e-0755.8
NC_012988:769981:782110782110782730621Methylobacterium extorquens DM4, complete genomeresolvase1e-0655.5
NC_012988:769981:793382793382794002621Methylobacterium extorquens DM4, complete genomeresolvase1e-0655.5
NC_007951:1928906:1943599194359919455241926Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative cassette chromosome recombinase resolvase, CcrB like2e-0654.7
NC_017068:2661419:2688876268887626902761401Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage integrase2e-0654.3
NC_014355:139324:153211153211153825615Candidatus Nitrospira defluvii, complete genomeDNA-invertase3e-0653.9
NC_009445:6621996:6670258667025866718681611Bradyrhizobium sp. ORS 278 chromosome, complete genomerecombinase3e-0653.9
NC_013440:3813132:3838534383853438401111578Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein4e-0653.5
NC_014825:137485:1374851374851391221638Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceResolvase domain4e-0653.1
NC_017082:532000:5446575446575458981242Bradyrhizobium sp. S23321, complete genomehypothetical protein8e-0652.4
NC_010617:988758:1005896100589610072811386Kocuria rhizophila DC2201, complete genomeputative recombinase9e-0652.4