Pre_GI: BLASTP Hits

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Query: NC_008380:4968492:4969137 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 4969137, End: 4972283, Length: 3147

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007404:974461:9798909798909830393150Thiobacillus denitrificans ATCC 25259, complete genomeadenine specific DNA methyltransferase01257
NC_015580:3834244:3845937384593738490923156Novosphingobium sp. PP1Y, complete genomeadenine specific DNA methyltransferase01044
NC_015581:1731120:1744151174415117474173267Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeadenine specific DNA methyltransferase0781
NC_013966:236463:2390822390822412802199Haloferax volcanii DS2 plasmid pHV4, complete sequenceadenine specific DNA methyltransferase6e-99362
NC_015846:790374:7962457962457975011257Capnocytophaga canimorsus Cc5 chromosome, complete genomeadenine specific DNA methyltransferase3e-97357
NC_011498:1391788:1391788139178813947752988Helicobacter pylori P12, complete genome5e-76286
NC_007777:1296000:1313124131312413164263303Frankia sp. CcI3, complete genomeputative DNA methyltransferase1e-45186
NC_014550:3377834:3409072340907234123473276Arthrobacter arilaitensis Re117, complete genomeputative site-specific DNA-methyltransferase (adenine specific)7e-40166
NC_010338:4108280:4120364412036441238943531Caulobacter sp. K31, complete genomehelicase-like protein5e-34147
NC_017986:1862408:1867994186799418728954902Pseudomonas putida ND6 chromosome, complete genomehelicase domain-containing protein1e-33145
NC_017955:1667500:1678714167871416834834770Modestobacter marinus, complete genomeHelicase3e-32141
NC_014153:3084356:3085256308525630902865031Thiomonas intermedia K12 chromosome, complete genometype III restriction protein res subunit4e-30134
NC_014844:442380:4507084507084555494842Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype III restriction protein res subunit4e-30134
NC_017098:1542284:1558173155817315630234851Spirochaeta africana DSM 8902 chromosome, complete genomeputative helicase9e-29129
NC_011958:976500:99589499589410007564863Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein5e-28127
NC_015152:2026049:2036181203618120410794899Spirochaeta sp. Buddy chromosome, complete genometype III restriction protein res subunit2e-27125
NC_012846:929570:9295709295709344804911Bartonella grahamii as4aup, complete genomehelicase/methyltransferase2e-27125
NC_008826:84218:8994089940947874848Methylibium petroleiphilum PM1 plasmid RPME01, complete sequenceadenine specific DNA methyltransferase, putative1e-26122
NC_008095:2117952:2132683213268321376534971Myxococcus xanthus DK 1622, complete genomeputative restriction/modification enzyme3e-25118
NC_008341:29038:3215032150366914542Nitrosomonas eutropha C91 plasmid1, complete sequencetype III restriction enzyme, res subunit8e-25116
NC_017167:1648913:1719871171987117242504380Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1adenine specific DNA methyltransferase1e-24116
NC_014168:1724993:1735931173593117408414911Segniliparus rotundus DSM 44985 chromosome, complete genometype III restriction protein res subunit2e-24115
NC_016943:1442885:1462107146210714668704764Blastococcus saxobsidens DD2, complete genomeputative Helicase9e-24113
NC_008538:46469:5781957819626604842Arthrobacter sp. FB24 plasmid 2, complete sequencetype III restriction enzyme, res subunit9e-21103
NC_008752:620802:6280546280546328834830Acidovorax avenae subsp. citrulli AAC00-1, complete genometype III restriction enzyme, res subunit7e-21103
NC_014215:349917:3633313633313681124782Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,helicase1e-20102
NC_013209:2032500:2034864203486420397714908Acetobacter pasteurianus IFO 3283-01, complete genomeDNA helicase restriction enzyme Type III R subunit4e-20101
NC_017121:2032500:2034846203484620397534908Acetobacter pasteurianus IFO 3283-07, complete genomeDNA helicase restriction enzyme Type III R subunit4e-20101
NC_017146:2035000:2037526203752620424334908Acetobacter pasteurianus IFO 3283-26, complete genomeDNA helicase restriction enzyme Type III R subunit4e-20101
NC_017150:1940000:1942610194261019475174908Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA helicase restriction enzyme Type III R subunit4e-20101
NC_009615:1734752:1779432177943217844264995Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase3e-20101
NC_017100:2035000:2037519203751920424114893Acetobacter pasteurianus IFO 3283-03, complete genomeDNA helicase restriction enzyme Type III R subunit4e-20100
NC_017108:2032500:2034846203484620389044059Acetobacter pasteurianus IFO 3283-12, complete genomeDNA helicase restriction enzyme Type III R subunit4e-20100
NC_017125:2035000:2037514203751420423914878Acetobacter pasteurianus IFO 3283-22, complete genomeDNA helicase restriction enzyme Type III R subunit5e-20100
NC_017111:2032500:2034834203483420389224089Acetobacter pasteurianus IFO 3283-32, complete genomeDNA helicase restriction enzyme Type III R subunit5e-20100
NC_006958:3240019:3249976324997632549164941Corynebacterium glutamicum ATCC 13032, complete genomeDNA or RNA helicase of superfamily II1e-1999.4
NC_003450:3266604:3276669327666932816004932Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase1e-1999.4
NC_012724:2682154:2696731269673127014944764Burkholderia glumae BGR1 chromosome 1, complete genomeAdenine specific DNA methyltransferase, putative3e-1998.2
NC_012846:1952178:1969434196943419744104977Bartonella grahamii as4aup, complete genome1e-1896.3
NC_012846:1778443:1797703179770318026804978Bartonella grahamii as4aup, complete genome1e-1896.3
NC_009328:2905000:2918927291892729236874761Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein3e-1894.7
NC_015578:2191000:2208590220859022135905001Treponema primitia ZAS-2 chromosome, complete genomeendonuclease and methylase LlaGI3e-1894.7
NC_002937:2263763:2270961227096122757484788Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeadenine specific DNA methyltransferase, putative1e-1792.8
NC_004578:20738:4744847448523584911Pseudomonas syringae pv. tomato str. DC3000, complete genomehelicase domain protein1e-1586.3
NC_015578:1038588:1050775105077510557544980Treponema primitia ZAS-2 chromosome, complete genomeendonuclease and methylase LlaGI1e-1586.3
NC_007651:3560652:3581602358160235833321731Burkholderia thailandensis E264 chromosome I, complete sequencehelicase domain protein3e-1481.3
NC_013165:1584977:1608043160804316135865544Slackia heliotrinireducens DSM 20476, complete genomepredicted helicase8e-1376.6
NC_015578:3914189:3925412392541239291103699Treponema primitia ZAS-2 chromosome, complete genomeDNA modification methylase2e-0965.5
NC_017167:2298962:232698323269832327630648Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1putative helicase4e-0654.7