Pre_GI: BLASTP Hits

Some Help

Query: NC_008380:4078670:4082349 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 4082349, End: 4083710, Length: 1362

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013730:7355010:7368559736855973699831425Spirosoma linguale DSM 74, complete genomeGalactonate dehydratase5e-116418
NC_011959:1965158:1974154197415419753261173Thermomicrobium roseum DSM 5159, complete genome2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase6e-56218
NC_014297:476510:5207865207865220061221Halalkalicoccus jeotgali B3 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-54214
NC_008380:4078670:4083728408372840849271200Rhizobium leguminosarum bv. viciae 3841, complete genomeputative madelate racemase/muconate lactonising family protein5e-49195
NC_019974:2421422:2444798244479824460361239Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase2e-48194
NC_019964:1873167:1890729189072918920331305Halovivax ruber XH-70, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase2e-47190
NC_014298:310964:3400563400563413211266Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing protein2e-47190
NC_006396:508802:5107795107795120291251Haloarcula marismortui ATCC 43049 chromosome I, complete sequencemandelate racemase/muconate lactonizing enzyme family1e-45184
NC_014363:8228:1919219192203371146Olsenella uli DSM 7084 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-31137
NC_019978:2532640:2540084254008425412321149Halobacteroides halobius DSM 5150, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase2e-30134
NC_007948:4558000:4596945459694545981051161Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme1e-30134
NC_008380:4078670:4081119408111940822851167Rhizobium leguminosarum bv. viciae 3841, complete genomeputative mandelate racemase/muconate lactonising family protein1e-29131
NC_008541:2119883:2139544213954421407311188Arthrobacter sp. FB24 chromosome 1, complete sequenceMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein4e-29129
NC_012589:2303096:2317250231725023185091260Sulfolobus islandicus L.S.2.15, complete genomeMandelate racemase/muconate lactonizing protein6e-29129
NC_012588:2173907:2188053218805321893121260Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-28127
NC_012623:355393:3614623614623627211260Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-28127
NC_012726:2179085:2190726219072621919851260Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-28127
NC_017276:2080102:2096193209619320974521260Sulfolobus islandicus REY15A chromosome, complete genomemandelate racemase (MR) subfamily2e-28127
NC_003888:3817000:3835870383587038370031134Streptomyces coelicolor A3(2), complete genomeisomerase3e-28126
NC_016745:1472000:1477793147779314789741182Oceanimonas sp. GK1 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-28125
NC_006510:1995916:1999092199909220002401149Geobacillus kaustophilus HTA426, complete genomegalactonate dehydratase6e-28125
NC_002689:1228061:1250055125005512512211167Thermoplasma volcanium GSS1, complete genomeGalactonate dehydratase1e-27124
NC_012632:2279544:2293690229369022949491260Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-27124
NC_008010:200796:2158792158792170271149Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme-like6e-27122
NC_019974:1184871:1230980123098012321311152Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase8e-27122
NC_014550:3534000:3547607354760735487551149Arthrobacter arilaitensis Re117, complete genomegalactonate dehydratase1e-26121
NC_015061:2927707:2929186292918629303341149Rahnella sp. Y9602 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-26120
NC_017047:2957957:2959435295943529605831149Rahnella aquatilis HX2 chromosome, complete genomegalactonate dehydratase2e-26120
NC_010498:1094000:1110613111061311117611149Escherichia coli SMS-3-5, complete genomemandelate racemase/muconate lactonizing enzyme family protein1e-25118
NC_013037:6281164:6338780633878063399581179Dyadobacter fermentans DSM 18053, complete genomeMandelate racemase/muconate lactonizing protein8e-26118
NC_013956:663295:6822426822426834951254Pantoea ananatis LMG 20103 chromosome, complete genomeRspA8e-25115
NC_010995:3640913:3645577364557736467851209Cellvibrio japonicus Ueda107, complete genomeStarvation sensing protein rspA2e-24114
NC_009800:1657550:1676062167606216772761215Escherichia coli HS, complete genomestarvation-sensing protein RspA5e-23109
NC_011959:1965158:1977016197701619782151200Thermomicrobium roseum DSM 5159, complete genomeprobable galactonate dehydratase protein7e-23108
NC_003305:1297785:1319671131967113208581188Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein1e-22108
NC_014364:815346:8539138539138551031191Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-22107
NC_016612:178864:1816411816411828941254Klebsiella oxytoca KCTC 1686 chromosome, complete genomedehydratase2e-22107
NC_012850:3454270:3455189345518934563341146Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeMandelate racemase/muconate lactonizing protein1e-21105
NC_014306:2518996:2518996251899625202491254Erwinia billingiae Eb661, complete genomeGalactonate dehydratase5e-22105
NC_017093:2357583:2375715237571523769681254Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme5e-22105
NC_005877:509877:5132215132215143961176Picrophilus torridus DSM 9790, complete genomegluconate/galactonate dehydratase4e-21103
NC_013174:2564979:2576791257679125780201230Jonesia denitrificans DSM 20603, complete genomemandelate racemase/muconate-lactonizing protein1e-20101
NC_014541:643604:6616346616346627551122Ferrimonas balearica DSM 9799 chromosome, complete genomeMandelate racemase/muconate lactonizing protein5e-2099.4
NC_007963:3553678:3562167356216735633391173Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme5e-2099.4
NC_009664:4696961:4757316475731647584161101Kineococcus radiotolerans SRS30216, complete genomeMandelate racemase/muconate lactonizing protein5e-1995.9
NC_009256:3056000:3075584307558430767321149Burkholderia vietnamiensis G4 chromosome 1, complete sequencegalactonate dehydratase1e-1894.4
NC_007963:2777066:2782685278268527838211137Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme3e-1893.6
NC_015151:665346:6873766873766884791104Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme, C-terminal domain protein7e-1892
NC_008786:3915000:3937759393775939390541296Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-1791.7
NC_011887:72364:8731387313885031191Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeMandelate racemase/muconate lactonizing protein4e-1789.7
NC_012669:1011473:1016366101636610176671302Beutenbergia cavernae DSM 12333, complete genomeMandelate racemase/muconate lactonizing protein4e-1789.7
NC_007948:4646344:4658443465844346595701128Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme4e-1789.4
NC_011959:1965158:1975415197541519766771263Thermomicrobium roseum DSM 5159, complete genomemandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme9e-1685.1
NC_008786:3045770:3053931305393130551271197Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein1e-1584.3
NC_013517:1038000:1039918103991810411171200Sebaldella termitidis ATCC 33386, complete genomeMandelate racemase/muconate lactonizing protein3e-1583.6
NC_015563:313283:3329173329173341041188Delftia sp. Cs1-4 chromosome, complete genomeL-rhamnonate dehydratase5e-1479.3
NC_014500:564864:5660205660205673661347Dickeya dadantii 3937 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein1e-1378.2
NC_010676:2720068:2731170273117027323031134Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein7e-1272.4
NC_012632:538967:5428355428355439531119Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1169.3
NC_012623:2004786:2009055200905520101731119Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-1067.8
NC_013740:2218215:2231462223146222326251164Acidaminococcus fermentans DSM 20731, complete genomeMandelate racemase/muconate lactonizing protein2e-1067.8
NC_015968:3053565:3058766305876630599201155Enterobacter asburiae LF7a chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-1066.6
NC_017275:927814:9468219468219479511131Sulfolobus islandicus HVE10/4 chromosome, complete genomemandelate racemase/muconate lactonizing family protein4e-1066.6
NC_009440:1045882:1054839105483910559811143Metallosphaera sedula DSM 5348 chromosome, complete genomemandelate racemase/muconate lactonizing protein4e-1066.2
NC_007181:1766910:1776768177676817778861119Sulfolobus acidocaldarius DSM 639, complete genomemandelate racemase/muconate lactonizing enzyme4e-1066.2
NC_011894:6708970:6722559672255967237431185Methylobacterium nodulans ORS 2060, complete genomeMandelate racemase/muconate lactonizing protein6e-1065.9
NC_019974:1184871:1201337120133712024221086Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase7e-1065.9
NC_009379:435404:4563424563424574751134Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein2e-0964.3
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein2e-0861.2
NC_011740:1494796:1510509151050915117171209Escherichia fergusonii ATCC 35469, complete genomeputative mandelate racemase2e-0860.5
NC_012880:3748665:3786817378681737879291113Dickeya dadantii Ech703, complete genomeMandelate racemase/muconate lactonizing protein4e-0859.7
NC_008786:2573558:2577007257700725781161110Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein6e-0859.3
NC_012588:742000:7617737617737628851113Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-0858.9
NC_003911:2540453:2565441256544125666101170Silicibacter pomeroyi DSS-3, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-0757.4
NC_014839:12519:172471724718019773Pantoea sp. At-9b plasmid pPAT9B02, complete sequence3e-0757
NC_012673:77610:9578795787969171131Exiguobacterium sp. AT1b, complete genomeMandelate racemase/muconate lactonizing protein9e-0652