Pre_GI: BLASTP Hits

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Query: NC_008380:4078670:4081119 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 4081119, End: 4082285, Length: 1167

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:4558000:4596945459694545981051161Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme2e-55216
NC_008541:2119883:2139544213954421407311188Arthrobacter sp. FB24 chromosome 1, complete sequenceMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein4e-54212
NC_003888:3817000:3835870383587038370031134Streptomyces coelicolor A3(2), complete genomeisomerase1e-53210
NC_006510:1995916:1999092199909220002401149Geobacillus kaustophilus HTA426, complete genomegalactonate dehydratase1e-48194
NC_013037:6281164:6338780633878063399581179Dyadobacter fermentans DSM 18053, complete genomeMandelate racemase/muconate lactonizing protein5e-48192
NC_008010:200796:2158792158792170271149Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme-like4e-47189
NC_002689:1228061:1250055125005512512211167Thermoplasma volcanium GSS1, complete genomeGalactonate dehydratase2e-47189
NC_019978:2532640:2540084254008425412321149Halobacteroides halobius DSM 5150, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase7e-47188
NC_016745:1472000:1477793147779314789741182Oceanimonas sp. GK1 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-46185
NC_011959:1965158:1974154197415419753261173Thermomicrobium roseum DSM 5159, complete genome2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase1e-45184
NC_014297:476510:5207865207865220061221Halalkalicoccus jeotgali B3 chromosome, complete genomeMandelate racemase/muconate lactonizing protein6e-44178
NC_006396:508802:5107795107795120291251Haloarcula marismortui ATCC 43049 chromosome I, complete sequencemandelate racemase/muconate lactonizing enzyme family1e-43177
NC_014363:8228:1919219192203371146Olsenella uli DSM 7084 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-42173
NC_014298:310964:3400563400563413211266Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing protein1e-41171
NC_014364:815346:8539138539138551031191Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-41170
NC_003911:2540453:2565441256544125666101170Silicibacter pomeroyi DSS-3, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-41170
NC_019974:2421422:2444798244479824460361239Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase1e-40167
NC_014550:3534000:3547607354760735487551149Arthrobacter arilaitensis Re117, complete genomegalactonate dehydratase2e-40167
NC_014541:643604:6616346616346627551122Ferrimonas balearica DSM 9799 chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-40166
NC_017047:2957957:2959435295943529605831149Rahnella aquatilis HX2 chromosome, complete genomegalactonate dehydratase1e-39164
NC_015061:2927707:2929186292918629303341149Rahnella sp. Y9602 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-39164
NC_005877:509877:5132215132215143961176Picrophilus torridus DSM 9790, complete genomegluconate/galactonate dehydratase1e-39164
NC_019974:1184871:1230980123098012321311152Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase3e-39162
NC_009256:3056000:3075584307558430767321149Burkholderia vietnamiensis G4 chromosome 1, complete sequencegalactonate dehydratase3e-39162
NC_007948:4646344:4658443465844346595701128Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme9e-39161
NC_015151:665346:6873766873766884791104Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme, C-terminal domain protein4e-38159
NC_007963:3553678:3562167356216735633391173Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme6e-37155
NC_010498:1094000:1110613111061311117611149Escherichia coli SMS-3-5, complete genomemandelate racemase/muconate lactonizing enzyme family protein4e-37155
NC_007181:1766910:1776768177676817778861119Sulfolobus acidocaldarius DSM 639, complete genomemandelate racemase/muconate lactonizing enzyme2e-35150
NC_011887:72364:8731387313885031191Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeMandelate racemase/muconate lactonizing protein3e-35149
NC_017093:2357583:2375715237571523769681254Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme3e-35149
NC_019964:1873167:1890729189072918920331305Halovivax ruber XH-70, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase4e-35149
NC_010676:2720068:2731170273117027323031134Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein1e-34147
NC_011959:1965158:1977016197701619782151200Thermomicrobium roseum DSM 5159, complete genomeprobable galactonate dehydratase protein1e-34147
NC_003305:1297785:1319671131967113208581188Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein1e-34147
NC_013730:7355010:7368559736855973699831425Spirosoma linguale DSM 74, complete genomeGalactonate dehydratase4e-34145
NC_013174:2564979:2576791257679125780201230Jonesia denitrificans DSM 20603, complete genomemandelate racemase/muconate-lactonizing protein2e-33143
NC_007963:2777066:2782685278268527838211137Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme4e-33142
NC_016612:178864:1816411816411828941254Klebsiella oxytoca KCTC 1686 chromosome, complete genomedehydratase4e-33142
NC_013956:663295:6822426822426834951254Pantoea ananatis LMG 20103 chromosome, complete genomeRspA2e-32140
NC_008786:3915000:3937759393775939390541296Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein4e-32139
NC_010995:3640913:3645577364557736467851209Cellvibrio japonicus Ueda107, complete genomeStarvation sensing protein rspA3e-32139
NC_015563:313283:3329173329173341041188Delftia sp. Cs1-4 chromosome, complete genomeL-rhamnonate dehydratase1e-31137
NC_012850:3454270:3455189345518934563341146Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeMandelate racemase/muconate lactonizing protein2e-31137
NC_014306:2518996:2518996251899625202491254Erwinia billingiae Eb661, complete genomeGalactonate dehydratase8e-31134
NC_011959:1965158:1975415197541519766771263Thermomicrobium roseum DSM 5159, complete genomemandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme2e-30133
NC_008786:3045770:3053931305393130551271197Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein3e-30133
NC_012588:2173907:2188053218805321893121260Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-30132
NC_012623:355393:3614623614623627211260Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-30132
NC_012726:2179085:2190726219072621919851260Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-30132
NC_017276:2080102:2096193209619320974521260Sulfolobus islandicus REY15A chromosome, complete genomemandelate racemase (MR) subfamily5e-30132
NC_009800:1657550:1676062167606216772761215Escherichia coli HS, complete genomestarvation-sensing protein RspA7e-30131
NC_012632:538967:5428355428355439531119Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-29131
NC_008380:4078670:4082349408234940837101362Rhizobium leguminosarum bv. viciae 3841, complete genomeputative mandelate racemase/muconate lactonising family protein1e-29131
NC_012589:2303096:2317250231725023185091260Sulfolobus islandicus L.S.2.15, complete genomeMandelate racemase/muconate lactonizing protein1e-29131
NC_012623:2004786:2009055200905520101731119Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-29129
NC_011894:6708970:6722559672255967237431185Methylobacterium nodulans ORS 2060, complete genomeMandelate racemase/muconate lactonizing protein6e-29128
NC_012632:2279544:2293690229369022949491260Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-28127
NC_007348:752692:7614247614247626141191Ralstonia eutropha JMP134 chromosome 2, complete sequenceMandelate racemase/muconate lactonizing enzyme9e-28124
NC_009664:4696961:4757316475731647584161101Kineococcus radiotolerans SRS30216, complete genomeMandelate racemase/muconate lactonizing protein6e-26118
NC_009440:1045882:1054839105483910559811143Metallosphaera sedula DSM 5348 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-24113
NC_008380:4078670:4083728408372840849271200Rhizobium leguminosarum bv. viciae 3841, complete genomeputative madelate racemase/muconate lactonising family protein5e-24112
NC_014500:564864:5660205660205673661347Dickeya dadantii 3937 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein4e-24112
NC_013517:1038000:1039918103991810411171200Sebaldella termitidis ATCC 33386, complete genomeMandelate racemase/muconate lactonizing protein8e-24111
NC_007952:3196085:3229683322968332307621080Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative mandelate racemase (MdlA)1e-23110
NC_011740:1494796:1510509151050915117171209Escherichia fergusonii ATCC 35469, complete genomeputative mandelate racemase2e-23110
NC_002578:1434396:1441606144160614427001095Thermoplasma acidophilum DSM 1728, complete genomemandelate racemase related protein4e-23109
NC_003888:3817000:3843523384352338446081086Streptomyces coelicolor A3(2), complete genomeracemase4e-23109
NC_019974:1184871:1201337120133712024221086Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase6e-21102
NC_012669:1011473:1016366101636610176671302Beutenbergia cavernae DSM 12333, complete genomeMandelate racemase/muconate lactonizing protein3e-2099.8
NC_014315:2787089:2814909281490928160121104Nitrosococcus watsoni C-113 chromosome, complete genomemandelate racemase/muconate lactonizing protein6e-2099
NC_014839:12519:172471724718019773Pantoea sp. At-9b plasmid pPAT9B02, complete sequence7e-2098.6
NC_009379:435404:4563424563424574751134Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein2e-1997.1
NC_017082:6444522:6446279644627964473701092Bradyrhizobium sp. S23321, complete genomemandelate racemase2e-1894
NC_014614:260782:2744012744012755041104Clostridium sticklandii, complete genomeputative muconate cycloisomerase2e-1893.6
NC_002678:6061448:6083376608337660845601185Mesorhizobium loti MAFF303099, complete genomechloromuconate cycloisomerase6e-1892.4
NC_016642:1990684:2010756201075620119251170Pseudovibrio sp. FO-BEG1 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-1891.7
NC_013740:2218215:2231462223146222326251164Acidaminococcus fermentans DSM 20731, complete genomeMandelate racemase/muconate lactonizing protein1e-1791.3
NC_008786:2573558:2577007257700725781161110Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein2e-1790.9
NC_015711:7265439:7270641727064172717591119Myxococcus fulvus HW-1 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein7e-1788.6
NC_007484:495784:5048755048755059781104Nitrosococcus oceani ATCC 19707, complete genomeMandelate racemase/muconate lactonizing enzyme7e-1788.6
NC_014376:693820:7121477121477132501104Clostridium saccharolyticum WM1 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-1687.8
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein6e-1685.5
NC_008319:787881:7904647904647914891026Synechococcus sp. CC9311, complete genomeMandelate racemase / muconate lactonizing enzyme, N-terminal domain protein1e-1584.7
NC_015968:3053565:3058766305876630599201155Enterobacter asburiae LF7a chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-1583.6
NC_012632:816000:8286828286828298841203Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-1480.9
NC_007948:517893:5355515355515366451095Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme3e-1480.1
NC_017275:927814:9468219468219479511131Sulfolobus islandicus HVE10/4 chromosome, complete genomemandelate racemase/muconate lactonizing family protein1e-1377.8
NC_012588:742000:7617737617737628851113Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein7e-1375.5
NC_014119:977136:9923849923849936731290Burkholderia sp. CCGE1002 chromosome chromosome 3, completeMandelate racemase/muconate lactonizing protein3e-1273.2
NC_015635:811500:8341248341248354251302Microlunatus phosphovorus NM-1, complete genomedehydratase3e-1273.2
NC_012726:2143670:2154817215481721560191203Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein4e-1272.8
NC_007963:2777066:2793703279370327949711269Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme1e-1171.2
NC_003317:1719546:1746116174611617473931278Brucella melitensis 16M chromosome I, complete sequenceMANDELATE RACEMASE3e-1169.7
NC_016023:1658377:1660267166026716613311065Bacillus coagulans 36D1 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-1067.8
NC_011740:1494796:1516005151600515172071203Escherichia fergusonii ATCC 35469, complete genomeMuconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE)2e-1067.4
NC_016943:1314500:1348685134868513499951311Blastococcus saxobsidens DD2, complete genomemandelate racemase2e-1067
NC_015556:4118304:4141558414155841427121155Pseudomonas fulva 12-X chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-1066.6
NC_012792:385670:3856703856703868361167Variovorax paradoxus S110 chromosome 2, complete genomeMandelate racemase/muconate lactonizing protein4e-1065.9
NC_014841:131308:1493361493361504481113Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceMandelate racemase/muconate lactonizing protein1e-0964.7
NC_015675:6493444:6514670651467065157761107Mesorhizobium opportunistum WSM2075 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-0963.9
NC_019973:5869500:5888959588895958900651107Mesorhizobium australicum WSM2073, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase2e-0963.9
NC_014923:5940500:5959999595999959611051107Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeMandelate racemase/muconate lactonizing protein2e-0963.9
NC_010508:2776283:2793244279324427944101167Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceMandelate racemase/muconate lactonizing protein3e-0963.5
NC_015873:238187:2559092559092570031095Megasphaera elsdenii DSM 20460, complete genomemandelate racemase/muconate lactonizing enzyme4e-0962.8
NC_015733:2720183:2742169274216927434821314Pseudomonas putida S16 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-0962.4
NC_015138:1582458:1585367158536715865361170Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completemandelate racemase/muconate lactonizing protein1e-0861.2
NC_015312:3290887:3303947330394733050681122Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemuconate and chloromuconate cycloisomerase1e-0861.2
NC_018643:807405:8227418227418238441104Alpha proteobacterium HIMB5 chromosome, complete genomemandelate racemase family protein,mandelate racemase family protein2e-0860.8
NC_014311:1545175:1552091155209115532571167Ralstonia solanacearum PSI07 chromosome, complete genomemandelate racemase2e-0860.5
NC_013174:562856:575260575260576216957Jonesia denitrificans DSM 20603, complete genomeMandelate racemase/muconate lactonizing protein7e-0652