Pre_GI: BLASTP Hits

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Query: NC_008380:2210649:2246396 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 2246396, End: 2247325, Length: 930

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1837500:1851992185199218538391848Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-75283
NC_012225:1497934:1511740151174015135841845Brachyspira hyodysenteriae WA1, complete genomehypothetical protein5e-63241
NC_011080:2870428:2880633288063328824021770Salmonella enterica subsp. enterica serovar Newport str. SL254,domain of unknown function protein2e-50199
NC_012691:2476223:2486206248620624879901785Tolumonas auensis DSM 9187, complete genomeprotein of unknown function DUF873e-49195
NC_010102:2862178:2871049287104928728241776Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-49195
NC_012917:3684840:3692075369207536938471773Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein8e-49194
NC_008577:2402165:2428148242814824299171770Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-45182
NC_011663:2813033:2822047282204728238251779Shewanella baltica OS223 chromosome, complete genomehypothetical protein5e-45181
NC_010801:238430:250589250589251125537Burkholderia multivorans ATCC 17616 chromosome 3, complete8e-45181
NC_006513:1379735:1448117144811714502402124Azoarcus sp. EbN1, complete genomehypothetical protein9e-1787.8
NC_008786:3845988:3855648385564838573721725Verminephrobacter eiseniae EF01-2, complete genomeATPase-like protein1e-1687.4
NC_003919:2824000:2844297284429728464142118Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1686.7
NC_014209:761832:7644937644937667932301Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function DUF874e-1685.5
NC_015177:1950461:1950461195046119525902130Pedobacter saltans DSM 12145 chromosome, complete genomehypothetical protein6e-1685.1
NC_015573:569625:6010336010336032402208Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein3e-1582.8
NC_010623:2057467:2072078207207820737901713Burkholderia phymatum STM815 chromosome 2, complete sequenceprotein of unknown function DUF871e-1480.9
NC_007005:98488:1094521094521113231872Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF872e-1480.1
NC_004578:4869673:4882082488208248833651284Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1479.7
NC_009719:1135523:1145974114597411479982025Parvibaculum lavamentivorans DS-1 chromosome, complete genomeATPase-like protein4e-1479
NC_009050:212270:2400382400382420171980Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceATPase-like protein6e-1478.6
NC_010125:955863:9786589786589804841827Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein8e-1477.8
NC_020409:2222000:2232477223247722343481872Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein1e-1273.9
NC_015151:1427965:1431000143100014329221923Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeATPase2e-1273.6
NC_009708:4182460:4191576419157641933811806Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-1273.2
NC_014537:603564:6071166071166090381923Vulcanisaeta distributa DSM 14429 chromosome, complete genomehypothetical protein3e-1272.8
NC_009720:5046861:5058053505805350600471995Xanthobacter autotrophicus Py2, complete genomeATPase-like protein5e-1272
NC_011662:535613:5407325407325424651734Thauera sp. MZ1T, complete genomeprotein of unknown function DUF876e-1271.6
NC_014972:137184:1478981478981497901893Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein7e-1271.6
NC_011071:1877500:1884907188490718866821776Stenotrophomonas maltophilia R551-3, complete genomeprotein of unknown function DUF877e-1271.6
NC_016885:1153277:1154428115442811562781851Pyrobaculum oguniense TE7 chromosome, complete genomeputative ATPase8e-1271.2
NC_013406:7024149:7052006705200670537961791Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein1e-1170.5
NC_015931:1443447:1452914145291414544131500Pyrolobus fumarii 1A, complete genomeHerA-ATP synthase with barrel domain2e-1170.1
NC_015320:1342105:1380643138064313822201578Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein3e-1169.7
NC_020541:2769419:2785343278534327872471905Rhodanobacter sp. 2APBS1, complete genomeputative ATPase5e-1168.6
NC_012997:817553:8307608307608326011842Teredinibacter turnerae T7901, complete genomehypothetical protein1e-1067.4
NC_015680:1315040:1337033133703313389491917Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein1e-1067
NC_015160:2145915:2159124215912421612142091Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein2e-1067
NC_015138:4205986:4219403421940342211361734Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein2e-1066.6
NC_016616:915755:9230349230349248631830Dechlorosoma suillum PS chromosome, complete genomeputative ATPase2e-1066.2
NC_019791:570923:5872775872775888151539Caldisphaera lagunensis DSM 15908 chromosome, complete genomeATPase3e-1065.9
NC_009659:1:7435743590241590Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein3e-1065.9
NC_010729:1014957:1032705103270510346061902Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein3e-1066.2
NC_015635:4097711:4127390412739041291381749Microlunatus phosphovorus NM-1, complete genomehypothetical protein4e-1065.9
NC_009901:2272206:2279689227968922813411653Shewanella pealeana ATCC 700345, complete genomeprotein of unknown function DUF871e-0964.3
NC_008639:1462000:1471367147136714731661800Chlorobium phaeobacteroides DSM 266, complete genomeprotein of unknown function DUF871e-0963.9
NC_018867:993903:1001287100128710030621776Dehalobacter sp. CF chromosome, complete genomeprotein of unknown function DUF872e-0963.2
NC_018866:925704:9366669366669384411776Dehalobacter sp. DCA chromosome, complete genomeBipolar DNA helicase2e-0963.2
NC_009441:4357593:4378411437841143801951785Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein3e-0962.8
NC_002947:4994335:5042929504292950446921764Pseudomonas putida KT2440, complete genomehypothetical protein4e-0962.4
NC_020829:2152000:2161000216100021629041905Pseudomonas denitrificans ATCC 13867, complete genomeATPase9e-0961.2
NC_011770:2499432:2534701253470125363861686Pseudomonas aeruginosa LESB58, complete genomeprotein of unknown function DUF879e-0961.2
NC_009050:212270:2580402580402597791740Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein1e-0860.8
NC_012660:165559:1904011904011922331833Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-0860.8
NC_013665:918313:9209109209109224391530Methanocella paludicola SANAE, complete genomehypothetical protein1e-0860.5
NC_015565:287900:3092013092013108861686Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein2e-0860.1
NC_014122:726070:7362547362547378971644Methanocaldococcus infernus ME chromosome, complete genomeprotein of unknown function DUF872e-0860.1
NC_013205:1275012:1290516129051612922431728Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,protein of unknown function DUF872e-0860.1
NC_011004:4183993:4209018420901842107631746Rhodopseudomonas palustris TIE-1, complete genomeprotein of unknown function DUF872e-0859.7
NC_014160:748743:7835657835657851061542Thermosphaera aggregans DSM 11486 chromosome, complete genomehypothetical protein3e-0859.3
NC_016024:1099602:1108817110881711106191803Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative ATPase3e-0859.7
NC_017271:149856:1608281608281626601833Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein3e-0859.7
NC_014011:962474:9707139707139724821770Aminobacterium colombiense DSM 12261 chromosome, complete genomeprotein of unknown function DUF874e-0859.3
NC_015519:2413323:2416193241619324178781686Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein5e-0858.9
NC_019792:2524130:2555390255539025570331644Natronobacterium gregoryi SP2 chromosome, complete genomeATPase6e-0858.5
NC_000961:828416:8419908419908436571668Pyrococcus horikoshii OT3, complete genomehypothetical protein6e-0858.5
NC_015474:1490668:1507956150795615095961641Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein2e-0756.2
NC_014408:806720:8243658243658259481584Methanothermobacter marburgensis str. Marburg chromosome, completeATPase2e-0756.6
NC_010999:1381497:138947013894701390051582Lactobacillus casei, complete genomePutative uncharacterized protein3e-0756.2
NC_013421:478586:4854094854094869891581Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF873e-0756.2
NC_014311:1106871:1114757111475711164541698Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein4e-0755.8
NC_013037:5395951:5403792540379254055731782Dyadobacter fermentans DSM 18053, complete genomeprotein of unknown function DUF874e-0755.8
NC_015676:1417456:1425013142501314271302118Methanosalsum zhilinae DSM 4017 chromosome, complete genomehypothetical protein5e-0755.5
NC_003413:1107965:1111866111186611135211656Pyrococcus furiosus DSM 3638, complete genomehypothetical protein5e-0755.5
NC_000868:1168819:1173575117357511752211647Pyrococcus abyssi GE5, complete genomehypothetical protein6e-0755.1
NC_021184:1484352:1506874150687415086191746Desulfotomaculum gibsoniae DSM 7213, complete genomeputative ATPase9e-0754.3
NC_013171:342714:3976513976513992731623Anaerococcus prevotii DSM 20548, complete genomeprotein of unknown function DUF873e-0653.1
NC_009455:273519:3137323137323153241593Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein3e-0652.8
NC_007503:1885571:1902198190219819042102013Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein9e-0651.2
NC_015216:2113556:2124209212420921257441536Methanobacterium sp. AL-21 chromosome, complete genomehypothetical protein1e-0551.2