Pre_GI: BLASTP Hits

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Query: NC_008380:2210649:2223311 Rhizobium leguminosarum bv. viciae 3841, complete genome

Start: 2223311, End: 2224471, Length: 1161

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This biovar nodulates legumes in the Tribe Viciae (Vicia, Pisum, Lathyrus, Lens). This strain is a spontaneous streptomycin-resistant mutant of strain 300. Nitrogen-fixing plant symbiont. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017146:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-26, complete genomestringent response modulating ppGpp metabolism protein3e-53209
NC_017125:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-22, complete genomestringent response modulating ppGpp metabolism protein3e-53209
NC_017121:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-07, complete genomestringent response modulating ppGpp metabolism protein3e-53209
NC_017111:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-32, complete genomestringent response modulating ppGpp metabolism protein3e-53209
NC_017108:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-12, complete genomestringent response modulating ppGpp metabolism protein3e-53209
NC_017100:867500:8747368747368758541119Acetobacter pasteurianus IFO 3283-03, complete genomestringent response modulating ppGpp metabolism protein3e-53209
NC_013209:867500:8747428747428758601119Acetobacter pasteurianus IFO 3283-01, complete genomestringent response modulating ppGpp metabolism protein3e-53209
NC_005140:340000:3513233513233523391017Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein4e-38159
NC_003888:7706226:7715801771580177168441044Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-36152
NC_012918:1660477:1671703167170316728481146Geobacter sp. M21 chromosome, complete genomeRelA/SpoT domain-containing protein5e-28125
NC_017045:1:426442645052789Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,putative BCR/ Guanosine polyphosphate pyrophosphohydrolase/ synthetase4e-26119
NC_020260:440000:4474354474354485351101Cronobacter sakazakii Sp291, complete genomeGTP pyrophosphokinase2e-24113
NC_015968:3301958:3313377331337733144861110Enterobacter asburiae LF7a chromosome, complete genomeRelA/SpoT domain-containing protein1e-21104
NC_007712:1516589:1528945152894515300601116Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-21102
NC_014121:2090630:209746720974672098267801Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-2099.8
NC_008011:213386:2133862133862155812196Lawsonia intracellularis PHE/MN1-00, complete genomeGuanosine polyphosphate pyrophosphohydrolases/synthetases3e-0860.1
NC_013446:2237854:2239726223972622419572232Comamonas testosteroni CNB-2, complete genome(p)ppGpp synthetase I, SpoT/RelA1e-0654.3
NC_008781:2655071:2674053267405326763232271Polaromonas naphthalenivorans CJ2, complete genome(p)ppGpp synthetase I, SpoT/RelA2e-0653.5