Pre_GI: BLASTP Hits

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Query: NC_008346:584305:589147 Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete

Start: 589147, End: 589527, Length: 381

Host Lineage: Syntrophomonas wolfei; Syntrophomonas; Syntrophomonadaceae; Clostridiales; Firmicutes; Bacteria

General Information: Syntrophomonas wolfeisubsp. wolfei str. Goettingen (DSM 2245B) was isolated from anaerobic digestor sludge. Fatty acid-oxidizing bacterium. This organism is an anaerobic syntrophic fatty acid-oxidizing bacterium. It is the only bacterium known to produce energy from anaerobic degradation of saturated four to eight carbon fatty acids with protons serving as the electron acceptor. The cells have an unusual multilayered gram-negative cell wall. Syntrophomonas wolfei grows in coculture with Methanospirillum hungatei and can be isolated from anaerobic environments such as aquatic sediment or sewage digestor sludge.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008346:584305:613841613841614575735Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesigma 28 (flagella/sporulation)2e-63240
NC_007644:1603696:161628816162881616968681Moorella thermoacetica ATCC 39073, complete genomesigma 28 (Flagella/Sporulation)2e-35147
NC_006270:2657726:266171326617132662438726Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)5e-34142
NC_006322:2658587:266257426625742663299726Bacillus licheniformis ATCC 14580, complete genomeSpoIIIC5e-34142
NC_014976:627935:631089631089631556468Bacillus subtilis BSn5 chromosome, complete genomesporulation sigma factor SigK3e-33140
NC_016047:2631511:263408426340842634812729Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-K factor6e-33139
NC_014479:2505823:250902725090272509755729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completesporulation sigma factor SigmaK6e-33139
NC_017195:2498113:250061925006192501347729Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-K factor6e-33139
NC_014639:2169277:217149621714962172224729Bacillus atrophaeus 1942 chromosome, complete genomesporulation sigma factor SigK1e-32138
CP002207:2169277:217149621714962172224729Bacillus atrophaeus 1942, complete genomesporulation sigma factor SigK1e-32138
UCMB5137:2054735:206023320602332060961729Bacillus atrophaeus UCMB-5137sporulation sigma factor SigK1e-32138
NC_019842:2575000:257786225778622578509648Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,sporulation sigma factor SigK2e-32137
NC_009725:2517428:252185025218502522572723Bacillus amyloliquefaciens FZB42, complete genomeSpoIIIC2e-32137
NC_020410:2509057:251185125118512512573723Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-K factor2e-32137
NC_017188:2512357:251601825160182516743726Bacillus amyloliquefaciens TA208 chromosome, complete genomesporulation sigma factor SigK2e-32137
NC_017191:2514401:251805925180592518787729Bacillus amyloliquefaciens XH7 chromosome, complete genomesporulation sigma factor SigK2e-32137
NC_014551:2510000:251515725151572515879723Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sporulation-specific sigma-K factor precursor (Sigma-27) (C-terminal fragment)1e-32137
NC_020272:1384525:140054414005441401266723Bacillus amyloliquefaciens IT-45, complete genomesporulation sigma factor SigK1e-32137
NC_015573:1979202:198377519837751984194420Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFliA/WhiG subfamily RNA polymerase sigma-28 subunit1e-30131
NC_019978:2036779:205421120542112054906696Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-K factor2e-30130
NC_010516:2676746:271203727120372712471435Clostridium botulinum B1 str. Okra, complete genomeRNA polymerase sigma-K factor2e-27120
NC_014328:1307490:132611813261181326819702Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative RNA polymerase sigma-K factor4e-25113
NC_014657:673500:688886688886689614729Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 28 subunit, flia/whig subfamily1e-24111
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige3e-23107
NC_014220:837926:841866841866842591726Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily8e-23105
NC_020291:1389114:139256713925671393274708Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-E factor SigE2e-22104
NC_009633:4485869:450354745035474504194648Alkaliphilus metalliredigens QYMF chromosome, complete genomeFliA/WhiG family RNA polymerase sigma factor5e-1476.3
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG2e-1064.3
NC_013165:2440883:245653524565352457479945Slackia heliotrinireducens DSM 20476, complete genomeRNA polymerase sigma factor, sigma-70 family2e-1064.3
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit6e-1062.8
NC_009454:1246393:126549412654941266273780Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit7e-1062.8
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily8e-1062.4
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg8e-1062.4
NC_015589:3085442:308799830879983088780783Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-F factor1e-0962
NC_015138:1582458:1597787159778716001292343Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRNA polymerase sigma-70 subunit RpoD1e-0962
NC_008752:1523768:1541468154146815438132346Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-0962
NC_012806:105133:1119901119901135911602Mycoplasma conjunctivae, complete genomeRNA polymerase sigma factor1e-0961.6
NC_013715:767722:7816667816667830481383Rothia mucilaginosa DY-18, complete genomeDNA-directed RNA polymerase, sigma subunit2e-0961.2
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily2e-0960.8
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0960.8
NC_011661:1332309:1332309133230913335501242Dictyoglomus turgidum DSM 6724, complete genomeputative RNA polymerase, sigma 70 family subunit2e-0960.8
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor3e-0960.5
NC_009952:2381601:2381601238160123835951995Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor3e-0960.5
NC_016593:2370000:239025823902582391010753Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeRNA polymerase sigma-F factor5e-0960.1
NC_014220:837926:842737842737843507771Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily4e-0960.1
NC_017195:2273216:229212822921282292895768Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-F factor5e-0959.7
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family6e-0959.7
NC_014377:1227850:123522212352221235947726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma subunit, RpoX/SigF6e-0959.7
NC_014448:487381:5041035041035056771575Mycoplasma hyorhinis HUB-1 chromosome, complete genomeRNA polymerase sigma factor6e-0959.7
NC_009380:1663545:1684802168480216864301629Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor6e-0959.7
NC_008268:1748635:1757720175772017592821563Rhodococcus sp. RHA1, complete genomesigma factor, sigma 70 type, probable group 29e-0958.9
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-0858.5
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD1e-0858.5
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0858.5
NC_010125:2295500:231102723110272312004978Gluconacetobacter diazotrophicus PAl 5, complete genomeputative RNA polymerase sigma-32 factor1e-0858.5
NC_011365:502620:519355519355520242888Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRNA polymerase factor sigma-321e-0858.2
NC_016109:5455060:5471736547173654728181083Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor1e-0858.2
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor2e-0858.2
NC_010995:2547164:2553509255350925545161008Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma factor RpoS2e-0858.2
NC_016786:1359064:1411626141162614132061581Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016785:1357500:1389513138951313910931581Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016783:1397975:1431953143195314335331581Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016782:1385800:1411361141136114129411581Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016789:1432000:1456893145689314584461554Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_012779:3570720:358928535892853590139855Edwardsiella ictaluri 93-146, complete genomealternative sigma factor RpoH, putative2e-0857.8
NC_014623:7331860:7336519733651973386392121Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma factor rpod2e-0857.8
NC_016799:1439000:1463172146317214647521581Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016801:1422500:1453156145315614547361581Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016802:1317365:1396152139615213977321581Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016790:1345638:1379067137906713805871521Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_016788:1376000:1406465140646514079851521Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_002935:1378566:1423091142309114245991509Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor2e-0857.8
NC_016800:1411000:1439503143950314410831581Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_019748:4129500:4144777414477741460271251Stanieria cyanosphaera PCC 7437, complete genomeRNA polymerase, sigma subunit, RpsC/SigC2e-0857.8
NC_016787:1350676:1402928140292814045201593Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor A2e-0857.8
NC_021177:4221309:422601242260124226878867Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor2e-0857.8
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-0857.4
NC_016781:1297782:1320469132046913220221554Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor rpoD2e-0857.4
NC_017303:1297793:1320477132047713220301554Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRNA polymerase sigma factor rpoD2e-0857.4
NC_007498:1666242:1677244167724416782871044Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, sigma 70/sigma 32 subunit2e-0857.4
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)4e-0857
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor4e-0857
NC_009921:5202607:5225702522570252269041203Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma 70 subunit, RpoD family4e-0857
NC_007946:3855445:386624838662483867102855Escherichia coli UTI89, complete genomecomponent of RNA polymerase, sigma 32 factor3e-0857
NC_008563:3888232:389904338990433899897855Escherichia coli APEC O1, complete genomeRNA polymerase sigma factor3e-0857
NC_011742:3799788:381378338137833814637855Escherichia coli S88 chromosome, complete genomeRNA polymerase factor sigma-323e-0857
NC_009656:475465:480115480115480969855Pseudomonas aeruginosa PA7 chromosome, complete genomeRNA polymerase factor sigma-324e-0856.6
NC_015662:15641:174671746718342876Buchnera aphidicola (Cinara tujafilina) chromosome, completeRNA polymerase sigma-32 factor6e-0856.2
NC_007298:2689731:271902027190202719949930Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma factor6e-0856.2
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit6e-0856.2
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor8e-0855.8
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD8e-0855.8
NC_008710:703740:7526687526687545601893Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoD8e-0855.8
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-0855.8
NC_015713:2453409:2453409245340924550731665Simkania negevensis Z chromosome gsn.131, complete genomerNA polymerase sigma factor rpoD7e-0855.8
NC_007413:1405817:1426867142686714281171251Anabaena variabilis ATCC 29413, complete genomeRNA polymerase sigma-like factor7e-0855.8
NC_008699:1816392:181882118188211819633813Nocardioides sp. JS614, complete genomesigma-70 region 2 domain protein7e-0855.8
NC_007516:2383097:2407948240794824090811134Synechococcus sp. CC9605, complete genomepossible type II alternative RNA polymerase sigma factor7e-0855.8
NC_013510:1849751:1870803187080318724821680Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily9e-0855.5
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS1e-0755.1
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS1e-0755.1
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS1e-0755.1
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor1e-0755.1
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor1e-0755.1
NC_013525:1953920:1974765197476519765551791Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0755.1
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0754.7
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0754.7
NC_021177:4221309:422711342271134228033921Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor2e-0754.7
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0754.7
NC_009659:543000:5459655459655484452481Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase primary sigma factor2e-0754.7
NC_011071:4000620:4024096402409640259521857Stenotrophomonas maltophilia R551-3, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-0754.3
NC_014761:1321187:1321187132118713226411455Oceanithermus profundus DSM 14977 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily2e-0754.3
NC_014733:2363838:2377778237777823796941917Methylovorus sp. MP688 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod2e-0754.3
NC_012969:2476318:2508883250888325107991917Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD2e-0754.3
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)2e-0754.3
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)2e-0754.3
NC_010296:5002428:5008809500880950100591251Microcystis aeruginosa NIES-843, complete genomeRNA polymerase sigma factor RpoD2e-0754.3
NC_015856:1182974:1198779119877912012742496Collimonas fungivorans Ter331 chromosome, complete genomeRNA polymerase sigma factor2e-0754.3
NC_013510:2782240:2799999279999928013331335Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-0754.3
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD2e-0754.3
NC_016782:1385800:141846314184631419452990Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_016785:1357500:139661513966151397604990Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_016786:1359064:141872814187281419717990Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_016787:1350676:141004114100411411030990Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_002935:1378566:143012114301211431110990Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor3e-0753.9
NC_011244:746801:7669497669497688411893Borrelia recurrentis A1, complete genomeRNA polymerase sigma factor RpoD3e-0753.9
NC_016789:1432000:146396714639671464956990Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_016783:1397975:143905514390551440044990Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_015947:3991696:4005239400523940070921854Burkholderia sp. JV3 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD3e-0753.9
NC_007651:72952:9341493414948651452Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma factor RpoD3e-0753.9
NC_016788:1376000:141350614135061414495990Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_016790:1345638:138610813861081387097990Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_014323:961825:9651409651409676922553Herbaspirillum seropedicae SmR1 chromosome, complete genomeRNA polymerase sigma-70 factor transcription regulator protein3e-0753.9
NC_009483:3024115:3042895304289530439051011Geobacter uraniireducens Rf4 chromosome, complete genomeRpoD family RNA polymerase sigma factor3e-0753.9
NC_016799:1439000:147027314702731471262990Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_008710:819389:820347820347821150804Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoS3e-0753.9
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0753.9
NC_009482:2109270:2130734213073421318461113Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0753.9
NC_010673:703816:7554327554327573241893Borrelia hermsii DAH, complete genomeRNA polymerase sigma factor RpoD3e-0753.9
NC_016802:1317365:140325414032541404243990Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_016801:1422500:146025714602571461246990Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_016800:1411000:144660414466041447593990Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor B3e-0753.9
NC_009850:1011293:1014453101445310163331881Arcobacter butzleri RM4018, complete genomeRNA polymerase sigma 70 factor4e-0753.5
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family4e-0753.5
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD4e-0753.5
NC_007517:1561466:158865115886511589631981Geobacter metallireducens GS-15, complete genomesigma 28 (Flagella/Sporulation)4e-0753.5
NC_016781:1327516:132751613275161328505990Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor sigB4e-0753.5
NC_016932:1309644:131240113124011313390990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor sigB4e-0753.5
NC_008700:312099:3187643187643216732910Shewanella amazonensis SB2B, complete genomeDNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein4e-0753.5
NC_009929:58465:800918009180900810Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma-70 factor, putative4e-0753.5
NC_014962:4479989:449534144953414496174834Isosphaera pallida ATCC 43644 chromosome, complete genomeRNA polymerase sigma-38 subunit RpoS5e-0753.1
NC_016109:785819:791016791016791861846Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor5e-0753.1
NC_015138:5046921:5053585505358550562212637Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit5e-0753.1
NC_007435:1077792:1089393108939310917952403Burkholderia pseudomallei 1710b chromosome II, complete sequenceRNA polymerase sigma factor5e-0753.1
NC_008260:2340824:2350147235014723520481902Alcanivorax borkumensis SK2, complete genomeRNA polymerase sigma factor RpoD5e-0753.1
NC_012721:1986436:2004708200470820071252418Burkholderia glumae BGR1 chromosome 2, complete genomeRNA polymerase, sigma 70 subunit, RpoD family protein5e-0753.1
NC_007650:722961:7258447258447282462403Burkholderia thailandensis E264 chromosome II, complete sequenceRNA polymerase sigma factor RpoD5e-0753.1
NC_015957:8677395:8696862869686286981061245Streptomyces violaceusniger Tu 4113 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit5e-0753.1
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily5e-0753.1
NC_010805:530876:5350295350295374432415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase primary sigma factor5e-0753.1
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor4e-0753.1
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor4e-0753.1
NC_010552:752007:7562057562057586222418Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD4e-0753.1
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)5e-0753.1
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD5e-0753.1
NC_009255:1071868:1076072107607210785012430Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRNA polymerase sigma factor RpoD5e-0753.1
NC_010086:1907959:1937861193786119402752415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD5e-0753.1
NC_013510:3065000:3081198308119830822801083Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-0752.8
NC_004578:568236:5888465888465906961851Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor7e-0752.8
NC_007005:5500196:5502219550221955040691851Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma factor7e-0752.8
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family7e-0752.8
NC_006351:2398403:2406884240688424089262043Burkholderia pseudomallei K96243 chromosome 2, complete sequenceRNA polymerase sigma factor7e-0752.8
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD7e-0752.8
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor7e-0752.8
NC_008609:112340:130809130809131687879Pelobacter propionicus DSM 2379, complete genomeRNA polymerase, sigma 32 subunit, RpoH7e-0752.8
NC_016629:3396500:3420075342007534218591785Desulfovibrio africanus str. Walvis Bay chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit6e-0752.8
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD6e-0752.8
NC_014330:697429:713067713067713921855Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA directed RNA polymerase sigma subunit6e-0752.8
NC_019908:2496149:250468525046852505539855Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA directed RNA polymerase sigma subunit6e-0752.8
NC_009078:2351046:2359522235952223617322211Burkholderia pseudomallei 1106a chromosome II, complete sequenceRNA polymerase sigma factor RpoD6e-0752.8
NC_009075:2428248:2436729243672924389392211Burkholderia pseudomallei 668 chromosome II, complete sequenceRNA polymerase sigma factor RpoD6e-0752.8
NC_014623:4535544:457504845750484575938891Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma-b factor6e-0752.8
NC_009930:4909:293182931830124807Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma-70 factor6e-0752.8
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor8e-0752.4
NC_018677:111500:1414281414281431641737Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoD8e-0752.4
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD1e-0652.4
NC_005070:2374850:239942623994262400412987Synechococcus sp. WH 8102, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family1e-0652
NC_014484:1163576:1170458117045811722001743Spirochaeta thermophila DSM 6192 chromosome, complete genomeRNA polymerase sigma factor1e-0652
NC_008513:13484:161811618117056876Buchnera aphidicola str. Cc (Cinara cedri), complete genomeRNA polymerase sigma-32 factor1e-0652
NC_009074:94000:1169431169431183911449Burkholderia pseudomallei 668 chromosome I, complete sequenceRNA polymerase sigma factor RpoD1e-0652
NC_013959:2449315:2470861247086124728251965Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD1e-0652
NC_007509:644000:6590416590416610742034Burkholderia sp. 383 chromosome 3, complete sequencesigma 70 (RpoD)1e-0652
NC_013016:1441424:1443383144338314453111929Neisseria meningitidis alpha14 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0652
NC_013894:1380564:140102114010211401953933Thermocrinis albus DSM 14484 chromosome, complete genomeputative RNA polymerase, sigma 70 family subunit1e-0651.6
NC_014314:755166:7722247722247737321509Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeRNA polymerase sigma 70 subunit RpoD subfamily2e-0651.6
NC_005125:182701:1947391947391958091071Gloeobacter violaceus PCC 7421, complete genomegroup 2 sigma 70-type sigma factor2e-0651.6
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0651.6
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD2e-0651.6
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD2e-0651.6
NC_012968:2228943:2243624224362422455641941Methylotenera mobilis JLW8, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-0651.6
NC_018607:1185195:118614611861461187072927Brachyspira pilosicoli B2904 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit1e-0651.6
NC_018604:1385788:138578813857881386714927Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor RpoD1e-0651.6
NC_017262:623351:625601625601626509909Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeRNA polymerase sigma-32 subunit RpoH1e-0651.6
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-0651.6
NC_010676:2869936:2882060288206028840571998Burkholderia phytofirmans PsJN chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD1e-0651.6
NC_014118:2316000:2320588232058823225851998Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD1e-0651.6
NC_014033:395000:418221418221418937717Prevotella ruminicola 23 chromosome, complete genomeputative sigma factor1e-0651.6
NC_019908:748635:781082781082782008927Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0651.6
NC_014330:2457731:245868224586822459626945Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-0651.6
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD2e-0651.2
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD2e-0651.2
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD2e-0651.2
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0651.2
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0651.2
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0651.2
NC_009380:1663545:166747116674711668469999Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor SigB2e-0651.2
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD2e-0651.2
NC_004545:15650:266692666927532864Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor2e-0651.2
NC_007086:4489153:4499598449959845014721875Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA polymerase sigma factor2e-0651.2
NC_005042:1719055:1722731172273117237501020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeDNA-directed RNA polymerase sigma subunit2e-0651.2
NC_010814:155834:170098170098170940843Geobacter lovleyi SZ, complete genomeputative RNA polymerase, sigma 70 family subunit2e-0651.2
NC_007760:1806136:182872918287291829454726Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)2e-0651.2
NC_011145:2543321:254626525462652546990726Anaeromyxobacter sp. K, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-0651.2
NC_011891:2607812:261038326103832611108726Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-0651.2
NC_007508:4476726:4490897449089744927741878Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor2e-0651.2
NC_013595:9149273:916531191653119166111801Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily2e-0651.2
NC_003902:4430621:4442015444201544438891875Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor RpoD2e-0651.2
NC_009439:4404942:4404942440494244067891848Pseudomonas mendocina ymp, complete genomeRNA polymerase sigma factor RpoD2e-0650.8
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-0650.8
NC_009091:1598044:1616615161661516176341020Prochlorococcus marinus str. MIT 9301, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family2e-0650.8
NC_009831:1255995:1273107127310712749451839Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family2e-0650.8
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-0650.8
NC_015379:6226661:6226661622666162285081848Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,RNA polymerase sigma factor (sigma-70)3e-0650.8
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD3e-0650.8
NC_009434:796878:8138468138468155551710Pseudomonas stutzeri A1501, complete genomeRNA polymerase sigma factor RpoD3e-0650.8
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 702e-0650.8
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 702e-0650.8
NC_017033:276741:2903512903512922311881Frateuria aurantia DSM 6220 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0650.8
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD2e-0650.8
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD2e-0650.8
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD2e-0650.8
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD2e-0650.8
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD2e-0650.8
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD2e-0650.8
NC_007947:2447635:2479188247918824811221935Methylobacillus flagellatus KT, complete genomesigma 70 (RpoD)2e-0650.8
NC_015581:1791658:179242117924211793278858Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH4e-0650.4
NC_016625:1259778:1274704127470412769172214Burkholderia sp. YI23 chromosome 2, complete sequenceRNA polymerase sigma-70 subunit RpoD4e-0650.4
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD3e-0650.4
NC_011761:2067695:2080861208086120827351875Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigma factor RpoD3e-0650.4
NC_014366:2393702:239507623950762395933858Gamma proteobacterium HdN1, complete genomeRNA polymerase sigma factor3e-0650.4
NC_014355:399938:4011424011424024011260Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma-70 factor5e-0650.1
NC_003155:883500:890067890067890906840Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma factor4e-0650.1
NC_014313:2059933:206294420629442063834891Hyphomicrobium denitrificans ATCC 51888 chromosome, completeRNA polymerase, sigma 32 subunit, RpoH4e-0650.1
NC_012918:2758775:279005027900502791027978Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit4e-0650.1
NC_012918:1814000:1815755181575518167561002Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit4e-0650.1
NC_009675:2515669:251566925156692516394726Anaeromyxobacter sp. Fw109-5 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH4e-0650.1
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-0650.1
NC_011146:3089297:3106852310685231078531002Geobacter bemidjiensis Bem, complete genomeRNA polymerase, sigma 70 subunit, RpoD family6e-0649.7
NC_009138:1843998:1860878186087818633042427Herminiimonas arsenicoxydans, complete genome6e-0649.7
NC_017518:1610803:1612761161276116146891929Neisseria meningitidis NZ-05/33 chromosome, complete genomeRNA polymerase sigma factor rpoD6e-0649.7
NC_017511:602000:6167016167016186291929Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor RpoD5e-0649.7
NC_014538:1311500:133260513326051333345741Thermoanaerobacter sp. X513 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily5e-0649.7
NC_009482:87193:958219582196795975Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor5e-0649.7
NC_016510:871000:877846877846878709864Flavobacterium columnare ATCC 49512 chromosome, complete genomeRpoD family RNA polymerase sigma factor8e-0649.3
NC_007604:1586243:161346416134641614396933Synechococcus elongatus PCC 7942, complete genomeprincipal RNA polymerase sigma factor SigA8e-0649.3
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor7e-0649.3
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD7e-0649.3
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A7e-0649.3
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)7e-0649.3
NC_006576:12230:144341443415384951Synechococcus elongatus PCC 6301, complete genomegroup2 RNA polymerase sigma factor RpoD68e-0649.3