Pre_GI: BLASTP Hits

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Query: NC_008314:1955793:1963319 Ralstonia eutropha H16 chromosome 2, complete sequence

Start: 1963319, End: 1963837, Length: 519

Host Lineage: Cupriavidus necator; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain (ATCC 17699; H16), formerly Alcaligenes eutrophus was originally isolated from sludge. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation. Other strains have been studied for their ability to produce polyhydroxybutyrates which have industrial application. Another strain is able to attack other bacteria and fungi when nutrients in the soil are low.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010084:3115:924292429760519Burkholderia multivorans ATCC 17616 chromosome 1, completeECF subfamily RNA polymerase sigma-24 factor7e-48189
NC_010804:52000:665466654667064519Burkholderia multivorans ATCC 17616 chromosome 1, completeECF subfamily RNA polymerase sigma-70 factor7e-48189
NC_009076:75535:782997829978814516Burkholderia pseudomallei 1106a chromosome I, complete sequenceRNA polymerase sigma factor, sigma-70 family3e-42171
NC_007651:72952:757787577876293516Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma-70 factor, ECF subfamily5e-42170
NC_012724:1:114171141711932516Burkholderia glumae BGR1 chromosome 1, complete genomeRNA polymerase sigma-70 factor, ECF subfamily protein2e-40164
NC_009720:251703:267010267010267516507Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-26119
NC_009720:2945655:295479629547962955302507Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-26119
NC_016622:1599681:160103816010381601589552Azospirillum lipoferum 4B, complete genomeECF family sigma factor2e-26117
NC_011894:2811573:282499228249922825498507Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-24112
NC_010172:1522707:154378715437871544350564Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family2e-24111
NC_011758:369704:379094379094379606513Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeRNA polymerase, sigma-24 subunit, ECF subfamily7e-23106
NC_014910:2015627:201649420164942017018525Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family5e-22103
NC_010170:3908500:391055939105593911074516Bordetella petrii, complete genomeRNA polymerase sigma factor4e-21100
NC_010505:5967324:597965759796575980331675Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1994.4
NC_011992:1318691:131869113186911319206516Acidovorax ebreus TPSY, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1994
NC_014932:1232346:130281113028111303365555Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma factor, ecr subfamily3e-1787.8
NC_008358:263458:267448267448268089642Hyphomonas neptunium ATCC 15444, complete genomeRNA polymerase sigma-70 factor, ECF family1e-1685.9
NC_010511:7553703:757897775789777579660684Methylobacterium sp. 4-46 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-1685.5
NC_012811:959725:963246963246963947702Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase ECF-type sigma factor6e-1683.6
NC_009436:3367194:338976233897623390211450Enterobacter sp. 638, complete genomeECF subfamily RNA polymerase sigma-24 factor6e-1683.6
NC_005956:1572500:159013115901311590685555Bartonella henselae str. Houston-1, complete genomeRNA polymerase sigma-70 factor1e-1582.8
NC_007761:781210:782989782989783618630Rhizobium etli CFN 42, complete genomeRNA polymerase sigma factor protein (sigma-24)3e-1581.3
NC_010510:139685:160605160605161294690Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1580.9
NC_004547:2285092:229013322901332290600468Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative RNA polymerase sigma factor5e-1580.5
NC_012846:1888000:190443319044331904987555Bartonella grahamii as4aup, complete genomeRNA polymerase sigma factor7e-1579.7
NC_010161:2050816:207017720701772070731555Bartonella tribocorum CIP 105476, complete genomeRNA polymerase sigma factor9e-1579.7
NC_020301:1486695:150583015058301506384555Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeRNA polymerase sigma factor1e-1479.3
NC_016631:3114000:313063631306363131205570Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-1478.6
NC_008095:5312926:531594253159425316469528Myxococcus xanthus DK 1622, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-1478.2
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE2e-1478.2
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE2e-1478.2
NC_013956:1762171:180161418016141802192579Pantoea ananatis LMG 20103 chromosome, complete genomeRpoE3e-1478.2
NC_010172:480000:497599497599498279681Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family4e-1477.4
NC_011757:1067543:107244910724491073129681Methylobacterium chloromethanicum CM4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1476.6
NC_012811:139498:143577143577144257681Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily7e-1476.6
NC_009668:1726000:173066117306611731212552Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceECF subfamily RNA polymerase sigma-24 factor1e-1375.5
NC_014500:2479814:249455224945522495001450Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-54 factor rpoN2e-1375.1
NC_020300:1344453:136080613608061361360555Bartonella australis Aust/NH1, complete genomeRNA polymerase sigma factor2e-1375.1
NC_016514:3573400:360540636054063605996591Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma-E factor6e-1373.6
NC_009668:1726000:173529217352921735792501Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceECF subfamily RNA polymerase sigma-24 factor7e-1373.2
NC_011894:4911500:492350949235094924204696Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1271.2
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-1270.9
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H3e-1270.9
NC_003909:1205605:122684212268421227327486Bacillus cereus ATCC 10987, complete genomeRNA polymerase sigma-70 factor8e-1269.7
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY1e-1168.9
NC_020541:1717140:173499017349901735481492Rhodanobacter sp. 2APBS1, complete genomeRNA polymerase sigma factor, sigma-70 family2e-1168.9
NC_011901:491783:492538492538493095558Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeECF subfamily RNA polymerase sigma-24 subunit3e-1167.8
NC_011758:369704:389938994459561Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1167.4
NC_019897:3810000:385687138568713857380510Thermobacillus composti KWC4 chromosome, complete genomeSigM family RNA polymerase sigma factor4e-1167.4
NC_005957:5091150:510720551072055107735531Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma-70 factor4e-1167.4
NC_011969:5063283:507947350794735080006534Bacillus cereus Q1 chromosome, complete genomeRNA polymerase sigma factor7e-1166.6
NC_014335:5038601:505489950548995055426528Bacillus cereus biovar anthracis str. CI chromosome, completeRNA polymerase sigma-70 factor7e-1166.6
NC_011773:5144990:516152451615245162051528Bacillus cereus AH820 chromosome, complete genomeRNA polymerase sigma factor2e-1065.5
NC_016906:4123000:413998141399814140532552Gordonia polyisoprenivorans VH2 chromosome, complete genomeRNA polymerase sigma factor2e-1065.1
NC_009720:251703:259356259356259874519Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor3e-1064.7
NC_009720:2945655:296366729636672964185519Xanthobacter autotrophicus Py2, complete genomeECF subfamily RNA polymerase sigma-24 factor3e-1064.7
NC_006274:5155395:517165151716515172184534Bacillus cereus E33L, complete genomeRNA polymerase sigma-70 factor3e-1064.7
NC_017208:5339331:535609453560945356621528Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase sigma factor4e-1064.3
NC_010475:2188827:218983121898312190430600Synechococcus sp. PCC 7002, complete genometranscription initiation factor sigma E6e-1063.5
NC_011772:5222917:524277052427705243297528Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily7e-1063.5
NC_014650:1893758:189647118964711896956486Geobacillus sp. Y4.1MC1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit9e-1063.2
NC_012581:5085915:510147551014755102002528Bacillus anthracis str. CDC 684 chromosome, complete genomeRNA polymerase sigma factor1e-0962.8
NC_006510:1731939:175291017529101753395486Geobacillus kaustophilus HTA426, complete genomeDNA-directed RNA polymerase ECF-type sigma factor1e-0962.8
NC_012472:5126186:514219551421955142722528Bacillus cereus 03BB102, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0962.8
NC_016779:5079460:509547950954795096006528Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor1e-0962.8
NC_008600:5113765:512978451297845130407624Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily9e-1062.8
NC_015660:1918307:191991019199101920395486Geobacillus thermoglucosidasius C56-YS93 chromosome, completeECF subfamily RNA polymerase sigma-24 subunit1e-0962.4
NC_020054:4028444:403406440340644034615552Fibrella aestuarina BUZ 2 drat genomeRNA polymerase sigma-E factor Sigma-244e-0960.8
NC_009952:3596399:360359636035963604171576Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor1e-0859.3
NC_014933:602312:614199614199614702504Bacteroides helcogenes P 36-108 chromosome, complete genomeRNA polymerase, sigma subunit, ECF family2e-0858.5
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-0858.5
NC_014364:4416467:442893744289374429710774Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_017243:424132:440723440723441268546Brachyspira intermedia PWS/A chromosome, complete genomeR polymerase sigma-70 factor 23e-0857.8
NC_017079:2634623:264607226460722646950879Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative RNA polymerase ECF-type sigma factor4e-0857.8
NC_012225:1657248:166270016627001663245546Brachyspira hyodysenteriae WA1, complete genomeR polymerase sigma-70 factor 25e-0857.4
NC_009437:2367842:237191723719172372468552Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeRNA polymerase sigma factor SigY6e-0857
NC_017316:2581781:258269025826902583187498Enterococcus faecalis OG1RF chromosome, complete genomeRNA polymerase sigma-70 factor8e-0856.6
NC_007951:2206263:220626322062632207000738Burkholderia xenovorans LB400 chromosome 1, complete sequenceSigma-24 (FecI)8e-0856.6
NC_014098:2225174:224373822437382244325588Bacillus tusciae DSM 2912 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0856.2
NC_016111:581143:599375599375600094720Streptomyces cattleya NRRL 8057, complete genomeRNA polymerase ECF-subfamily sigma factor1e-0756.2
NC_014934:869715:876370876370876804435Cellulophaga algicola DSM 14237 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily1e-0755.8
NC_004668:3053119:305311930531193053616498Enterococcus faecalis V583, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0755.8
NC_013595:8553904:857219585721958572755561Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0755.8
NC_015311:2626850:266808926680892668571483Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 22e-0755.1
NC_008699:2260606:2262345226234522636131269Nocardioides sp. JS614, complete genomesigma-70 region 2 domain protein2e-0755.1
NC_015949:1180755:118484711848471185398552Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0754.7
NC_010162:9207000:9230543923054392315501008Sorangium cellulosum 'So ce 56', complete genomeECF family RNA polymerase sigma factor3e-0754.7
NC_014392:969498:100562310056231006174552Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.7
NC_007760:645016:645016645016645522507Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma-24 (FecI-like)4e-0754.3
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor5e-0753.9
NC_009664:4423829:462452046245204625191672Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0753.5
NC_009092:1684467:170170617017061702344639Shewanella loihica PV-4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0753.1
NC_014720:1161841:117795711779571178508552Caldicellulosiruptor kronotskyensis 2002 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily9e-0753.1
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor9e-0753.1
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor9e-0753.1
NC_012034:1783912:178800617880061788557552Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.8
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor1e-0652.8
NC_013159:1885985:1890369189036918916551287Saccharomonospora viridis DSM 43017, complete genomeRNA polymerase, sigma subunit, ECF family1e-0652.4
NC_017030:9818064:981751098175109818067558Corallococcus coralloides DSM 2259 chromosome, complete genomeECF subfamily RNA polymerase sigma factor2e-0652
NC_016109:8664974:868860186886018689278678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor2e-0652
NC_016109:62000:940019400194678678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor2e-0652
NC_014614:2500301:250120025012002501682483Clostridium sticklandii, complete genomeSigV4e-0651.2
NC_008536:2961460:296649229664922967064573Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.2
NC_018681:441014:4615964615964628731278Nocardia brasiliensis ATCC 700358 chromosome, complete genomesigma factor3e-0651.2
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor4e-0650.8
NC_010162:10764788:107860241078602410786647624Sorangium cellulosum 'So ce 56', complete genomeputative RNA polymerase sigma factor4e-0650.8
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor5e-0650.4
NC_010556:141374:154091154091154654564Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.4
NC_012590:193895:211507211507212055549Corynebacterium aurimucosum ATCC 700975, complete genomeECF-family sigma factor C8e-0649.7