Pre_GI: BLASTN Hits

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Query: NC_008309:555680 Haemophilus somnus 129PT, complete genome

Start: 555680, End: 579297, Length: 23618

Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain is an asymptomatic carrier strain that was serum-resistant. Causes disease in cattle. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002940:919175*91917594297523801Haemophilus ducreyi 35000HP, complete genome2e-28135BLASTN svgBLASTP svg
NC_008700:672326*67232669663424309Shewanella amazonensis SB2B, complete genome3e-21111BLASTN svgBLASTP svg
NC_009053:12573021257302128078923488Actinobacillus pleuropneumoniae L20, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013722:1905655*1905655193296127307Xanthomonas albilineans, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012913:28050628050630911628611Aggregatibacter aphrophilus NJ8700, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008321:3815940*3815940385514239203Shewanella sp. MR-4, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004347:40078474007847403509927253Shewanella oneidensis MR-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002663:19880001988000201040322404Pasteurella multocida subsp. multocida str. Pm70, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002528:404545*40454542822723683Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete2e-1075.8BLASTN svgBLASTP svg
NC_013416:15883691588369161218823820Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009052:4168776*4168776418945120676Shewanella baltica OS155, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007712:17200017200019101619017Sodalis glossinidius str. 'morsitans', complete genome3e-0661.9BLASTN svgBLASTP svg