Pre_GI: BLASTN Hits

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Query: NC_008309:385592 Haemophilus somnus 129PT, complete genome

Start: 385592, End: 409099, Length: 23508

Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain is an asymptomatic carrier strain that was serum-resistant. Causes disease in cattle. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome3e-24121BLASTN svgBLASTP svg
NC_013961:30838163083816310609922284Erwinia amylovora, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012214:74530274530276695921658Erwinia pyrifoliae Ep1/96, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010694:71550071550073887123372Erwinia tasmaniensis, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008309:18278091827809185114023332Haemophilus somnus 129PT, complete genome2e-31145BLASTN svgBLASTP svg
NC_008309:1851189*1851189187944728259Haemophilus somnus 129PT, complete genome0797BLASTN svgBLASTP svg
NC_008309:12893701289370131490625537Haemophilus somnus 129PT, complete genome1e-168601BLASTN svgBLASTP svg
NC_008309:1200245*1200245121859918355Haemophilus somnus 129PT, complete genome2e-99371BLASTN svgBLASTP svg
NC_008309:84207284207286931527244Haemophilus somnus 129PT, complete genome1e-82315BLASTN svgBLASTP svg
NC_008309:19055019055022259932050Haemophilus somnus 129PT, complete genome1e-82315BLASTN svgBLASTP svg
NC_008309:502983*50298352926826286Haemophilus somnus 129PT, complete genome4e-79303BLASTN svgBLASTP svg
NC_008309:11552181155218117824923032Haemophilus somnus 129PT, complete genome4e-70274BLASTN svgBLASTP svg
NC_007645:6013242*6013242603721023969Hahella chejuensis KCTC 2396, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009654:1123709*1123709114240218694Marinomonas sp. MWYL1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010554:26468062646806272651179706Proteus mirabilis HI4320, complete genome3e-46194BLASTN svgBLASTP svg