Query: NC_008278:6854759 Frankia alni ACN14a, complete genome
Start: 6854759, End: 6882053, Length: 27295
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015957:2755709 | 2755709 | 2780747 | 25039 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_015588:1213873 | 1213873 | 1250117 | 36245 | Isoptericola variabilis 225 chromosome, complete genome | 6e-20 | 107 | BLASTN svg | BLASTP svg |
NC_015434:3755560* | 3755560 | 3783758 | 28199 | Verrucosispora maris AB-18-032 chromosome, complete genome | 6e-20 | 107 | BLASTN svg | BLASTP svg |
NC_013441:382597* | 382597 | 424222 | 41626 | Gordonia bronchialis DSM 43247, complete genome | 6e-20 | 107 | BLASTN svg | BLASTP svg |
NC_014659:1731121 | 1731121 | 1758583 | 27463 | Rhodococcus equi 103S, complete genome | 9e-19 | 103 | BLASTN svg | BLASTP svg |
NC_015576:612164 | 612164 | 674880 | 62717 | Mycobacterium sp. JDM601 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_013757:3897413 | 3897413 | 3931815 | 34403 | Geodermatophilus obscurus DSM 43160, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_008278:6885254 | 6885254 | 6931868 | 46615 | Frankia alni ACN14a, complete genome | 9e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_004369:3082691 | 3082691 | 3105896 | 23206 | Corynebacterium efficiens YS-314, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008278:744777 | 744777 | 763165 | 18389 | Frankia alni ACN14a, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009434:3611738* | 3611738 | 3748875 | 137138 | Pseudomonas stutzeri A1501, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_006513:1695487 | 1695487 | 1720393 | 24907 | Azoarcus sp. EbN1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_019902:2306961 | 2306961 | 2331612 | 24652 | Thioalkalivibrio nitratireducens DSM 14787, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011959:972798* | 972798 | 999093 | 26296 | Thermomicrobium roseum DSM 5159, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |