Pre_GI: BLASTN Hits

Some Help

Query: NC_008278:514600 Frankia alni ACN14a, complete genome

Start: 514600, End: 536327, Length: 21728

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009921:4757148*4757148478108523938Frankia sp. EAN1pec, complete genome02274BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome01170BLASTN svgBLASTP svg
NC_007777:10188241018824104517626353Frankia sp. CcI3, complete genome9e-68266BLASTN svgBLASTP svg
NC_009921:56816775681677570432122645Frankia sp. EAN1pec, complete genome3e-24121BLASTN svgBLASTP svg
NC_009921:26057212605721262856122841Frankia sp. EAN1pec, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009921:32558333255833327496419132Frankia sp. EAN1pec, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013757:90050090050091836917870Geodermatophilus obscurus DSM 43160, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015434:25274122527412255409926688Verrucosispora maris AB-18-032 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014210:15884261588426161009921674Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_008278:1876435*1876435189875422320Frankia alni ACN14a, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009921:85497578549757862261572859Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg