Pre_GI: BLASTN Hits

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Query: NC_008278:3025899 Frankia alni ACN14a, complete genome

Start: 3025899, End: 3045599, Length: 19701

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:296526*29652632302726502Frankia alni ACN14a, complete genome02123BLASTN svgBLASTP svg
NC_008278:1876435*1876435189875422320Frankia alni ACN14a, complete genome2e-87331BLASTN svgBLASTP svg
NC_008278:31695003169500319375824259Frankia alni ACN14a, complete genome1e-54222BLASTN svgBLASTP svg
NC_007777:49543064954306497563821333Frankia sp. CcI3, complete genome3e-52214BLASTN svgBLASTP svg
NC_007777:4016000*4016000403859922600Frankia sp. CcI3, complete genome9e-43182BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome3e-36161BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome5e-26127BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_018750:51144345114434513594121508Streptomyces venezuelae ATCC 10712, complete genome2e-25125BLASTN svgBLASTP svg
NC_013093:73773773773776222824492Actinosynnema mirum DSM 43827, complete genome2e-25125BLASTN svgBLASTP svg
NC_013093:832971*83297185669123721Actinosynnema mirum DSM 43827, complete genome3e-24121BLASTN svgBLASTP svg
NC_010572:28435892843589286504421456Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-22115BLASTN svgBLASTP svg
NC_007777:4892150*4892150493295540806Frankia sp. CcI3, complete genome7e-22113BLASTN svgBLASTP svg
NC_013967:19678961967896199023822343Haloferax volcanii DS2 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_014761:74311374311376488521773Oceanithermus profundus DSM 14977 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_014831:329983*32998335731327331Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_021177:54196205419620544465625037Streptomyces fulvissimus DSM 40593, complete genome7e-19103BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome7e-19103BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome3e-18101BLASTN svgBLASTP svg
NC_013169:12900001290000131283622837Kytococcus sedentarius DSM 20547, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015588:24682072468207249482226616Isoptericola variabilis 225 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_013947:44133824413382443709923718Stackebrandtia nassauensis DSM 44728 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_015953:47934844793484481122917746Streptomyces sp. SirexAA-E chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010505:33763223376322340791331592Methylobacterium radiotolerans JCM 2831, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020260:1535394*1535394155809922706Cronobacter sakazakii Sp291, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010998:11105211105213523024179Rhizobium etli CIAT 652 plasmid pA, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_009778:14778411477841150009922259Enterobacter sakazakii ATCC BAA-894, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015656:33007473300747332502424278Frankia symbiont of Datisca glomerata chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014831:21330602133060217362540566Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003047:3202125*3202125322912727003Sinorhizobium meliloti 1021, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014729:296103*29610331944823346Halogeometricum borinquense DSM 11551 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013172:95377295377297644022669Brachybacterium faecium DSM 4810, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003305:1297785*1297785132171123927Agrobacterium tumefaciens str. C58 chromosome linear, complete4e-1177.8BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013743:1450417*1450417147310922693Haloterrigena turkmenica DSM 5511, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007777:24593572459357247973120375Frankia sp. CcI3, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_007777:5087405*5087405511177224368Frankia sp. CcI3, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008148:30248673024867304671521849Rubrobacter xylanophilus DSM 9941, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008825:32985063298506332293624431Methylibium petroleiphilum PM1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009142:949510*94951097814228633Saccharopolyspora erythraea NRRL 2338, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009921:52200052200056210240103Frankia sp. EAN1pec, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010612:54030005403000542141218413Mycobacterium marinum M, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_020133:50205005020500504274122242Mycobacterium liflandii 128FXT, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_011004:4183993*4183993422629442302Rhodopseudomonas palustris TIE-1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015656:2900730*2900730292259921870Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_020453:31035493103549312489221344Agromonas oligotrophica S58 DNA, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013960:13848813848816763229145Nitrosococcus halophilus Nc4 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013406:38741573874157389565621500Paenibacillus sp. Y412MC10 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008340:2614000*2614000263940025401Alkalilimnicola ehrlichei MLHE-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015954:1222776*1222776126551142736Halophilic archaeon DL31 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_013173:12598981259898129609936202Desulfomicrobium baculatum DSM 4028, complete genome9e-0660BLASTN svgBLASTP svg
NC_010681:12345001234500126213227633Burkholderia phytofirmans PsJN chromosome 1, complete sequence9e-0660BLASTN svgBLASTP svg