Query: NC_008278:256427 Frankia alni ACN14a, complete genome
Start: 256427, End: 282407, Length: 25981
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_014210:3248526 | 3248526 | 3273061 | 24536 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 7e-112 | 412 | BLASTN svg | BLASTP svg |
| NC_013510:2937530* | 2937530 | 2963307 | 25778 | Thermomonospora curvata DSM 43183, complete genome | 1e-110 | 408 | BLASTN svg | BLASTP svg |
| NC_018750:6237875 | 6237875 | 6261480 | 23606 | Streptomyces venezuelae ATCC 10712, complete genome | 5e-51 | 210 | BLASTN svg | BLASTP svg |
| NC_013235:508585* | 508585 | 537296 | 28712 | Nakamurella multipartita DSM 44233, complete genome | 2e-47 | 198 | BLASTN svg | BLASTP svg |
| NC_013530:2492312 | 2492312 | 2524596 | 32285 | Xylanimonas cellulosilytica DSM 15894, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
| NC_018581:2768743* | 2768743 | 2832626 | 63884 | Gordonia sp. KTR9 chromosome, complete genome | 1e-30 | 143 | BLASTN svg | BLASTP svg |
| NC_013521:345308* | 345308 | 381719 | 36412 | Sanguibacter keddieii DSM 10542, complete genome | 9e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_014830:3387479 | 3387479 | 3434440 | 46962 | Intrasporangium calvum DSM 43043 chromosome, complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_010572:5445081 | 5445081 | 5486741 | 41661 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_014391:1812500* | 1812500 | 1860947 | 48448 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008786:1298817* | 1298817 | 1324100 | 25284 | Verminephrobacter eiseniae EF01-2, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_008705:868623 | 868623 | 950990 | 82368 | Mycobacterium sp. KMS, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_008146:861319 | 861319 | 944146 | 82828 | Mycobacterium sp. MCS, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_009076:3564500 | 3564500 | 3609731 | 45232 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_018524:4235773 | 4235773 | 4257599 | 21827 | Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008782:2326439* | 2326439 | 2368574 | 42136 | Acidovorax sp. JS42, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_014666:8488567 | 8488567 | 8507493 | 18927 | Frankia sp. EuI1c chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_006177:1422932 | 1422932 | 1447044 | 24113 | Symbiobacterium thermophilum IAM 14863, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |