Pre_GI: BLASTN Hits

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Query: NC_008278:1472709 Frankia alni ACN14a, complete genome

Start: 1472709, End: 1496530, Length: 23822

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:68852546885254693186846615Frankia alni ACN14a, complete genome1e-94355BLASTN svgBLASTP svg
NC_009921:3098271*3098271316510166831Frankia sp. EAN1pec, complete genome1e-57232BLASTN svgBLASTP svg
NC_007777:12960001296000131759921600Frankia sp. CcI3, complete genome1e-57232BLASTN svgBLASTP svg
NC_007777:47966274796627481750420878Frankia sp. CcI3, complete genome2e-50208BLASTN svgBLASTP svg
NC_008278:53997155399715542275223038Frankia alni ACN14a, complete genome3e-49204BLASTN svgBLASTP svg
NC_014151:13739371373937139470220766Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_008278:50538995053899508662732729Frankia alni ACN14a, complete genome2e-25125BLASTN svgBLASTP svg
NC_007777:135222*13522216590830687Frankia sp. CcI3, complete genome1e-20109BLASTN svgBLASTP svg
NC_009921:53714835371483538959918117Frankia sp. EAN1pec, complete genome8e-19103BLASTN svgBLASTP svg
NC_013093:1036772*1036772108759950828Actinosynnema mirum DSM 43827, complete genome3e-18101BLASTN svgBLASTP svg
NC_014318:13201701320170134146221293Amycolatopsis mediterranei U32 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009921:55319725531972555201920048Frankia sp. EAN1pec, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014318:9120651*9120651914722326573Amycolatopsis mediterranei U32 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_019673:1039258*1039258106559926342Saccharothrix espanaensis DSM 44229 complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006513:27082132708213273362325411Azoarcus sp. EbN1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020064:1962172*1962172199309930928Serratia marcescens FGI94, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013131:15938401593840162389230053Catenulispora acidiphila DSM 44928, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009921:52756945275694530509929406Frankia sp. EAN1pec, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009921:43990004399000442459925600Frankia sp. EAN1pec, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010612:53011355301135532701825884Mycobacterium marinum M, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009921:64836606483660651171428055Frankia sp. EAN1pec, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011770:45421834542183456916026978Pseudomonas aeruginosa LESB58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015312:1893945*1893945191339219448Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009921:87176598717659874014722489Frankia sp. EAN1pec, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008611:10151381015138103966724530Mycobacterium ulcerans Agy99, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011979:31129113112911313409921189Geobacter sp. FRC-32, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011146:34265003426500347858852089Geobacter bemidjiensis Bem, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008595:18692841869284189175722474Mycobacterium avium 104, complete genome3e-0661.9BLASTN svgBLASTP svg