Query: NC_008278:1472709 Frankia alni ACN14a, complete genome
Start: 1472709, End: 1496530, Length: 23822
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_008278:6885254 | 6885254 | 6931868 | 46615 | Frankia alni ACN14a, complete genome | 1e-94 | 355 | BLASTN svg | BLASTP svg |
NC_009921:3098271* | 3098271 | 3165101 | 66831 | Frankia sp. EAN1pec, complete genome | 1e-57 | 232 | BLASTN svg | BLASTP svg |
NC_007777:1296000 | 1296000 | 1317599 | 21600 | Frankia sp. CcI3, complete genome | 1e-57 | 232 | BLASTN svg | BLASTP svg |
NC_007777:4796627 | 4796627 | 4817504 | 20878 | Frankia sp. CcI3, complete genome | 2e-50 | 208 | BLASTN svg | BLASTP svg |
NC_008278:5399715 | 5399715 | 5422752 | 23038 | Frankia alni ACN14a, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_014151:1373937 | 1373937 | 1394702 | 20766 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_008278:5053899 | 5053899 | 5086627 | 32729 | Frankia alni ACN14a, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_007777:135222* | 135222 | 165908 | 30687 | Frankia sp. CcI3, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_009921:5371483 | 5371483 | 5389599 | 18117 | Frankia sp. EAN1pec, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_013093:1036772* | 1036772 | 1087599 | 50828 | Actinosynnema mirum DSM 43827, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_014318:1320170 | 1320170 | 1341462 | 21293 | Amycolatopsis mediterranei U32 chromosome, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010505:400950 | 400950 | 425376 | 24427 | Methylobacterium radiotolerans JCM 2831, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_009921:5531972 | 5531972 | 5552019 | 20048 | Frankia sp. EAN1pec, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_014318:9120651* | 9120651 | 9147223 | 26573 | Amycolatopsis mediterranei U32 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_019673:1039258* | 1039258 | 1065599 | 26342 | Saccharothrix espanaensis DSM 44229 complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_006513:2708213 | 2708213 | 2733623 | 25411 | Azoarcus sp. EbN1, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_020064:1962172* | 1962172 | 1993099 | 30928 | Serratia marcescens FGI94, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013131:1593840 | 1593840 | 1623892 | 30053 | Catenulispora acidiphila DSM 44928, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009921:5275694 | 5275694 | 5305099 | 29406 | Frankia sp. EAN1pec, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009921:4399000 | 4399000 | 4424599 | 25600 | Frankia sp. EAN1pec, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010612:5301135 | 5301135 | 5327018 | 25884 | Mycobacterium marinum M, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014375:1146328* | 1146328 | 1177099 | 30772 | Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009921:6483660 | 6483660 | 6511714 | 28055 | Frankia sp. EAN1pec, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011770:4542183 | 4542183 | 4569160 | 26978 | Pseudomonas aeruginosa LESB58, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015312:1893945* | 1893945 | 1913392 | 19448 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009921:8717659 | 8717659 | 8740147 | 22489 | Frankia sp. EAN1pec, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008611:1015138 | 1015138 | 1039667 | 24530 | Mycobacterium ulcerans Agy99, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008463:4342119 | 4342119 | 4369203 | 27085 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_011979:3112911 | 3112911 | 3134099 | 21189 | Geobacter sp. FRC-32, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011146:3426500 | 3426500 | 3478588 | 52089 | Geobacter bemidjiensis Bem, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008595:1869284 | 1869284 | 1891757 | 22474 | Mycobacterium avium 104, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |