Pre_GI: BLASTN Hits

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Query: NC_008278:132000 Frankia alni ACN14a, complete genome

Start: 132000, End: 152301, Length: 20302

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014666:11170001117000113732420325Frankia sp. EuI1c chromosome, complete genome6e-44186BLASTN svgBLASTP svg
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome8e-31143BLASTN svgBLASTP svg
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome3e-30141BLASTN svgBLASTP svg
NC_015656:36534403653440367842924990Frankia symbiont of Datisca glomerata chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_020133:5485528*5485528550857423047Mycobacterium liflandii 128FXT, complete genome3e-21111BLASTN svgBLASTP svg
NC_013174:2455420*2455420249080635387Jonesia denitrificans DSM 20603, complete genome1e-20109BLASTN svgBLASTP svg
NC_015125:1136734*1136734116252925796Microbacterium testaceum StLB037, complete genome7e-19103BLASTN svgBLASTP svg
NC_015576:808926*80892683565426729Mycobacterium sp. JDM601 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_009921:1813500*1813500184695033451Frankia sp. EAN1pec, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_002677:2571310*2571310259641125102Mycobacterium leprae TN, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_008711:424482*42448244882424343Arthrobacter aurescens TC1, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_011896:2571232*2571232259562024389Mycobacterium leprae Br4923, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_015145:26937492693749273661842870Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_013595:9994000*99940001001201918020Streptosporangium roseum DSM 43021, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013729:666406*66640668414717742Kribbella flavida DSM 17836, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008278:29723232972323301617343851Frankia alni ACN14a, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007164:453743*45374347209918357Corynebacterium jeikeium K411, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_006087:2214209*2214209223440320195Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008278:92523192523194928524055Frankia alni ACN14a, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_019673:7951493*7951493797009918607Saccharothrix espanaensis DSM 44229 complete genome6e-1073.8BLASTN svgBLASTP svg
NC_019673:13847951384795141142926635Saccharothrix espanaensis DSM 44229 complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014006:924417*92441794759923183Sphingobium japonicum UT26S chromosome 1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013355:105500*10550012627720778Zymomonas mobilis subsp. mobilis NCIB 11163, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010506:2146444*2146444217391127468Shewanella woodyi ATCC 51908, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008095:3719441*3719441374439224952Myxococcus xanthus DK 1622, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014118:13311641331164135459923436Burkholderia sp. CCGE1002 chromosome chromosome 2, complete1e-0869.9BLASTN svgBLASTP svg
NC_014246:496976*49697651846521490Mobiluncus curtisii ATCC 43063 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014355:34353433435343346146626124Candidatus Nitrospira defluvii, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010125:2295500*2295500231693521436Gluconacetobacter diazotrophicus PAl 5, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009767:5230790*5230790525299722208Roseiflexus castenholzii DSM 13941, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006905:2805877*2805877282870222826Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0765.9BLASTN svgBLASTP svg
NC_006511:3364448*3364448338809923652Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-0765.9BLASTN svgBLASTP svg
NC_004631:283289*28328930183618548Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-0765.9BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000913:4159090*4159090417760618517Escherichia coli K12, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928160:4248621*4248621427441825798Escherichia coli IAI1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928160:2785792*2785792280821622425Escherichia coli IAI1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002516:1196000*1196000121818122182Escherichia coli KO11, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002185:2889656*2889656291209922444Escherichia coli W, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007946:3683371*3683371370609922729Escherichia coli UTI89, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008278:874015*87401590122927215Frankia alni ACN14a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014666:19696021969602199407424473Frankia sp. EuI1c chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013850:1198134*1198134121800019867Klebsiella variicola At-22 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011750:4543135*4543135456499721863Escherichia coli IAI39 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011149:2701916*2701916272409922184Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-0765.9BLASTN svgBLASTP svg
NC_011080:2789744*2789744281281123068Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-0765.9BLASTN svgBLASTP svg
NC_010473:4256000*4256000427821222213Escherichia coli str. K-12 substr. DH10B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010468:4455201*4455201447359918399Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010102:283364*28336430624522882Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-0765.9BLASTN svgBLASTP svg
NC_009648:3192483*3192483321423721755Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006177:3457637*3457637348146423828Symbiobacterium thermophilum IAM 14863, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009480:1261961*1261961128733125371Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete6e-0763.9BLASTN svgBLASTP svg
NC_013510:16140001614000163174917750Thermomonospora curvata DSM 43183, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014550:1581812*1581812167775695945Arthrobacter arilaitensis Re117, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015656:43677644367764439222424461Frankia symbiont of Datisca glomerata chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013947:46029594602959462471821760Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013595:4951396*4951396497512223727Streptosporangium roseum DSM 43021, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008278:31695003169500319375824259Frankia alni ACN14a, complete genome9e-0660BLASTN svgBLASTP svg
NC_011999:1633262*1633262165161518354Macrococcus caseolyticus JCSC5402, complete genome9e-0660BLASTN svgBLASTP svg
NC_013209:23848262384826240502620201Acetobacter pasteurianus IFO 3283-01, complete genome9e-0660BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome9e-0660BLASTN svgBLASTP svg
NC_014220:1670000*1670000168813518136Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015565:1647554*1647554166559918046Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_015594:214500*21450024065526156Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete9e-0660BLASTN svgBLASTP svg
NC_007503:2338110*2338110237510836999Carboxydothermus hydrogenoformans Z-2901, complete genome9e-0660BLASTN svgBLASTP svg