Pre_GI: BLASTP Hits

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Query: NC_008278:613329:625168 Frankia alni ACN14a, complete genome

Start: 625168, End: 625779, Length: 612

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family7e-30130
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator8e-1787
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator1e-1686.7
NC_013739:5535945:554067855406785541244567Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family2e-1685.5
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator5e-1684.3
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator6e-1684
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR7e-1684
NC_013093:3068486:311332431133243113875552Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family1e-1583.2
NC_013850:2846069:285969628596962860289594Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family4e-1581.3
NC_017955:343931:358000358000358650651Modestobacter marinus, complete genomeTetR family transcriptional regulator9e-1580.1
NC_015434:1173794:119680711968071197418612Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator1e-1479.7
NC_011283:2836000:286975928697592870352594Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator TetR family2e-1479.3
NC_015709:1769806:178762117876211788307687Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator3e-1478.2
NC_008146:20047:442044420444809606Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family8e-1477
NC_008705:27434:515445154452149606Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family8e-1477
NC_013929:5850599:586993558699355870588654Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator1e-1376.3
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator3e-1375.1
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR4e-1374.7
NC_008699:2294361:233821723382172338930714Nocardioides sp. JS614, complete genomeregulatory protein, TetR6e-1374.3
NC_015951:107360:117786117786118340555Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeregulatory protein TetR2e-1272.4
NC_009921:1813500:184397718439771844687711Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family3e-1271.6
NC_011365:1171536:117691611769161177497582Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator4e-1271.2
NC_007508:5093365:510796051079605108592633Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family6e-1270.9
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator8e-1270.1
NC_015434:666692:702511702511703194684Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-1168.9
NC_015063:122000:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator3e-1168.6
NC_015063:1:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator3e-1168.6
NC_015138:4205986:422692442269244227514591Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeregulatory protein TetR6e-1167.4
NC_014323:3976351:400574140057414006313573Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein6e-1167.4
NC_006361:4597718:462450046245004625183684Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator7e-1167
NC_010508:2776283:278996127899612790557597Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family1e-1066.6
NC_009953:2867864:289295728929572893628672Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator1e-1066.6
NC_007492:3180480:319538131953813195968588Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family1e-1066.2
NC_014323:3976351:400723340072334007799567Herbaspirillum seropedicae SmR1 chromosome, complete genomeTetR family transcription regulator protein1e-1066.2
NC_014666:1117000:113313811331381133842705Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR4e-1064.7
NC_015566:3417951:342511634251163425712597Serratia sp. AS12 chromosome, complete genomeregulatory protein TetR4e-1064.7
NC_009664:10718:169251692517515591Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family6e-1063.9
NC_016582:6999074:700012270001227000724603Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator1e-0963.2
NC_012704:696374:705911705911706603693Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family2e-0962.4
NC_015656:2900730:291491029149102915503594Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR2e-0962
NC_016111:1904859:191737419173741917961588Streptomyces cattleya NRRL 8057, complete genometetR family transcriptional regulator3e-0961.6
NC_015957:7348269:735711373571137357745633Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR4e-0961.6
NC_015580:3411802:342310334231033423645543Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator4e-0961.2
NC_016582:7699420:770664677066467707239594Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator4e-0961.2
NC_014318:1537732:154140715414071541916510Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator6e-0960.8
NC_012912:2800884:281222328122232812819597Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family5e-0960.8
NC_016932:1246235:125202512520251252627603Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHTH-type transcriptional repressor KstR1e-0860.1
NC_009921:4903688:490439949043994905013615Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family2e-0858.9
NC_016147:151224:176252176252176779528Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR/AcrR family transcriptional regulator2e-0858.9
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator2e-0858.9
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family2e-0858.9
NC_014329:1261480:126727012672701267872603Corynebacterium pseudotuberculosis FRC41 chromosome, completeTetR family transcriptional regulator3e-0858.2
NC_016781:1261300:126709012670901267692603Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeHTH-type transcriptional repressor KstR3e-0858.2
NC_017031:1261289:126707912670791267681603Corynebacterium pseudotuberculosis P54B96 chromosome, completeHTH-type transcriptional repressor KstR3e-0858.2
NC_017300:1258861:126465112646511265253603Corynebacterium pseudotuberculosis 1002 chromosome, completeHTH-type transcriptional repressor KstR3e-0858.2
NC_017301:1261167:126695712669571267559603Corynebacterium pseudotuberculosis C231 chromosome, completeHTH-type transcriptional repressor KstR3e-0858.2
NC_017303:1261311:126710112671011267703603Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHTH-type transcriptional repressor KstR3e-0858.2
NC_017305:1258840:126463012646301265232603Corynebacterium pseudotuberculosis PAT10 chromosome, completeHTH-type transcriptional repressor KstR3e-0858.2
NC_016788:1349500:134957413495741350164591Corynebacterium diphtheriae HC04 chromosome, complete genomeTetR family transcriptional regulator5e-0857.8
NC_016785:1321700:133174713317471332337591Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeTetR family transcriptional regulator5e-0857.8
NC_016799:1343020:140561614056161406206591Corynebacterium diphtheriae 31A chromosome, complete genomeTetR family transcriptional regulator5e-0857.8
NC_016800:1378728:137872813787281379318591Corynebacterium diphtheriae BH8 chromosome, complete genomeTetR family transcriptional regulator5e-0857.8
NC_016783:1374464:137446413744641375054591Corynebacterium diphtheriae INCA 402 chromosome, complete genomeTetR family transcriptional regulator6e-0857.4
NC_016789:1334514:139597213959721396562591Corynebacterium diphtheriae PW8 chromosome, complete genomeTetR family transcriptional regulator6e-0857.4
NC_016801:1361597:139529213952921395882591Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeTetR family transcriptional regulator6e-0857.4
NC_016802:1317365:135106213510621351652591Corynebacterium diphtheriae HC02 chromosome, complete genomeTetR family transcriptional regulator6e-0857.4
NC_013526:955848:976385976385977116732Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeregulatory protein TetR6e-0857.4
NC_003888:4523500:452350245235024524395894Streptomyces coelicolor A3(2), complete genometetR-family transcriptional regulator6e-0857.4
NC_017093:5225864:523639552363955237063669Actinoplanes missouriensis 431, complete genomeputative TetR-family transcriptional regulator1e-0756.6
NC_009664:4347718:435952443595244360177654Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-0755.8
NC_007164:380000:392463392463393029567Corynebacterium jeikeium K411, complete genomeputative transcriptional regulator (TetR family)2e-0652.4
NC_009664:4423829:442487344248734425499627Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-0652
NC_013521:2193203:219552721955272196075549Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family7e-0650.8