Pre_GI: BLASTP Hits

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Query: NC_008278:5399715:5418092 Frankia alni ACN14a, complete genome

Start: 5418092, End: 5419423, Length: 1332

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007777:4796627:4796627479662747979371311Frankia sp. CcI3, complete genomerestriction modification system DNA specificity domain3e-33143
NC_015953:2349503:2376073237607323773111239Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-27124
NC_010545:1475410:1490965149096514922001236Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, specificity subunit1e-22107
NC_018876:1061682:1092892109289210942621371Methanolobus psychrophilus R15 chromosome, complete genomehsdS1e-21104
NC_016027:1902854:1926268192626819274581191Gluconacetobacter xylinus NBRC 3288, complete genometype I DNA specificity S subunit1e-1894.7
NS_000195:219785:2500322500322513541323Candidatus Cloacamonas acidaminovoransputative Type I restriction-modification system specificity subunit2e-1894
NC_008611:3579500:359645435964543597116663Mycobacterium ulcerans Agy99, complete genome2e-1894
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system5e-1892.8
NC_004347:4441110:4439626443962644411131488Shewanella oneidensis MR-1, complete genometype I restriction-modification system, S subunit1e-1688.2
NC_007908:1108494:1128342112834211295351194Rhodoferax ferrireducens T118, complete genomerestriction modification system DNA specificity domain9e-1685.1
NC_016593:956839:961568961568962326759Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-1584.7
NC_014206:2807879:2818599281859928200561458Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-1583.2
NC_014550:2562053:2590617259061725918701254Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system specificity subunit6e-1582.4
NC_013440:3813132:3832106383210638333771272Haliangium ochraceum DSM 14365, complete genomerestriction modification system DNA specificity domain protein2e-1481.3
NC_003902:555699:5640055640055652971293Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative restriction modification system specificity subunit3e-1480.1
NC_007086:557789:5660955660955673871293Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction modification system specificity subunit3e-1480.1
NC_011138:3881446:3898916389891638999981083Alteromonas macleodii 'Deep ecotype', complete genometype I site-specific deoxyribonuclease4e-1479.7
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S6e-1479.3
NC_010003:1126800:1142463114246311437521290Petrotoga mobilis SJ95, complete genomerestriction modification system DNA specificity domain6e-1479
NC_008313:1:94609460107281269Ralstonia eutropha H16 chromosome 1, complete sequenceType I restriction-modification system specificity subunit2e-1377.8
NC_004369:256262:2803292803292815581230Corynebacterium efficiens YS-314, complete genomeputative restriction enzyme subunit S3e-1377
NC_012881:1802000:1822804182280418240061203Desulfovibrio salexigens DSM 2638, complete genomerestriction modification system DNA specificity domain protein3e-1377
NC_016147:2337244:2348124234812423492871164Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1376.6
NC_008146:4019711:4029860402986040311191260Mycobacterium sp. MCS, complete genomeRestriction endonuclease S subunits-like protein3e-1376.6
NC_008705:4053070:4064342406434240656011260Mycobacterium sp. KMS, complete genomerestriction endonuclease S subunits-like protein3e-1376.6
NC_013799:1:1649316493177731281Hydrogenobacter thermophilus TK-6, complete genomerestriction endonuclease S subunit3e-1376.6
NC_017161:1:1655416554178341281Hydrogenobacter thermophilus TK-6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1376.6
NC_015125:1668780:1680807168080716819851179Microbacterium testaceum StLB037, complete genomerestriction endonuclease S subunits6e-1375.9
NC_019771:3237000:3256940325694032582681329Anabaena cylindrica PCC 7122, complete genomerestriction modification system DNA specificity domain protein1e-1275.1
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1273.9
NC_009338:817854:8285608285608296661107Mycobacterium gilvum PYR-GCK chromosome, complete genomerestriction modification system DNA specificity subunit3e-1273.2
NC_016745:1548426:1556423155642315582191797Oceanimonas sp. GK1 chromosome, complete genometype I restriction-modification system specificity5e-1272.8
NC_014974:758129:7645347645347655921059Thermus scotoductus SA-01 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-1272.8
NC_015259:734795:7492687492687504401173Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative Restriction modification system, type I hsdS6e-1272.4
NC_008752:3684739:3713465371346537147541290Acidovorax avenae subsp. citrulli AAC00-1, complete genomerestriction modification system DNA specificity domain1e-1171.2
NC_015320:1690047:1699124169912417003861263Archaeoglobus veneficus SNP6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-1169.3
NC_008271:140846:1461601461601473351176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencetype I restriction-modification system specificity subunit8e-1168.6
NC_015865:229883:2407132407132420051293Thermococcus sp. 4557 chromosome, complete genomerestriction modification system DNA specificity subunit1e-1067.8
NC_009720:1248866:1263097126309712644491353Xanthobacter autotrophicus Py2, complete genomerestriction modification system DNA specificity subunit4e-1066.2
NC_009523:907775:9102129102129113901179Roseiflexus sp. RS-1 chromosome, complete genomerestriction modification system DNA specificity subunit8e-1065.5
NC_010645:369408:3960523960523972901239Bordetella avium 197N, complete genomerestriction modification system, specificity subunit9e-1065.1
NC_011726:3051408:307105630710563071772717Cyanothece sp. PCC 8801, complete genomerestriction modification system DNA specificity domain protein1e-0964.7
NC_011745:2209288:2218310221831022198751566Escherichia coli ED1a chromosome, complete genomeputative type I restriction modification system protein1e-0964.7
NC_018645:13408:2450224502257221221Desulfobacula toluolica Tol2, complete genometype-1 restriction enzyme EcoKI specificity protein3e-0963.5
NC_016147:1961000:197630919763091977286978Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeRestriction endonuclease S subunits-like protein5e-0962.8
NC_006270:741731:7518027518027529951194Bacillus licheniformis ATCC 14580, complete genomeHsdIB7e-0962.4
NC_006322:741516:7515867515867527791194Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-0962.4
NC_019757:5748432:5751595575159557527551161Cylindrospermum stagnale PCC 7417, complete genomerestriction endonuclease S subunit9e-0962
NC_015737:449914:4612094612094623541146Clostridium sp. SY8519, complete genomehypothetical protein9e-0962
NC_009077:2308634:2321856232185623232111356Mycobacterium sp. JLS, complete genomerestriction modification system DNA specificity domain1e-0861.6
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0861.6
NC_009953:3224412:3233728323372832349661239Salinispora arenicola CNS-205 chromosome, complete genomerestriction endonuclease S subunits-like protein1e-0861.2
NC_011083:4547825:4598267459826745994091143Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,restriction modification system DNA specificity domain2e-0860.8
NC_018876:587094:6087896087896100811293Methanolobus psychrophilus R15 chromosome, complete genometype I restriction-modification system, S subunit2e-0860.5
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit2e-0860.5
NC_013720:1382561:1397756139775613990211266Pirellula staleyi DSM 6068, complete genomerestriction modification system DNA specificity domain protein3e-0860.1
NC_011979:3112911:3123744312374431256781935Geobacter sp. FRC-32, complete genomeRestriction endonuclease S subunit-like protein4e-0860.1
NC_013203:1351941:1375039137503913764181380Atopobium parvulum DSM 20469, complete genomehypothetical protein5e-0859.3
NC_010994:859500:8739068739068751801275Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, specificity subunit7e-0858.9
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS27e-0858.9
NC_009052:4335754:4345846434584643471291284Shewanella baltica OS155, complete genomerestriction modification system DNA specificity domain7e-0858.9
NC_015677:1282865:1291978129197812937441767Ramlibacter tataouinensis TTB310 chromosome, complete genometype I restriction- modification, DNA specificity subunit7e-0858.9
NC_010814:1441327:1458977145897714603201344Geobacter lovleyi SZ, complete genomerestriction modification system DNA specificity domain9e-0858.5
NC_014166:1424754:1432374143237414335251152Arcobacter nitrofigilis DSM 7299 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0758.2
NC_014414:1104386:1119888111988811210871200Parvularcula bermudensis HTCC2503 chromosome, complete genometype I restriction-modification system specificity subunit1e-0758.2
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit2e-0757.4
NC_005363:3562205:3576704357670435779571254Bdellovibrio bacteriovorus HD100, complete genometype I restriction-modification system, S subunit2e-0757.4
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein3e-0756.6
NC_008346:2579756:2600348260034826015891242Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRestriction endonuclease S subunits-like protein4e-0756.6
NC_006361:2920028:2925616292561629268001185Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system specificity determinant4e-0756.6
NC_015635:4864349:4880217488021748814341218Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system specificity subunit1e-0655.1
NC_021177:7462000:7473467747346774763822916Streptomyces fulvissimus DSM 40593, complete genomeN-6 DNA methylase1e-0655.1
NC_015578:3495034:350381135038113504440630Treponema primitia ZAS-2 chromosome, complete genometype I site-specific deoxyribonuclease1e-0655.1
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein1e-0654.7
NC_008740:443274:4727574727574740761320Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain1e-0654.7
NC_010571:1334000:1344968134496813462811314Opitutus terrae PB90-1, complete genomerestriction modification system DNA specificity domain1e-0654.7
NC_015161:1556766:1592163159216315933531191Deinococcus proteolyticus MRP chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0654.3
NC_012881:3004784:3009162300916230104091248Desulfovibrio salexigens DSM 2638, complete genomerestriction modification system DNA specificity domain protein2e-0654.3
NC_018876:2151226:2161350216135021625671218Methanolobus psychrophilus R15 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0653.9
NC_002937:1764117:1781460178146017824791020Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetype I restriction-modification enzyme, S subunit3e-0653.5
NC_010170:4196197:4209964420996442123572394Bordetella petrii, complete genometype I restriction-modification system, S subunit4e-0653.1
NC_016047:2480921:2491021249102124922981278Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetype I restriction-modification enzyme, S subunit8e-0652