Pre_GI: BLASTP Hits

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Query: NC_008278:514600:526039 Frankia alni ACN14a, complete genome

Start: 526039, End: 526866, Length: 828

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:603829:615937615937616770834Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein1e-53209
NC_019673:1988853:203800820380082038724717Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated protein cas5 family protein6e-23107
NC_015389:481282:493160493160493864705Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cas5e family1e-22107
NC_007164:775000:779093779093779800708Corynebacterium jeikeium K411, complete genomehypothetical protein1e-21103
NC_014210:1588426:159214415921441592872729Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein Cas5 family2e-2099.4
NC_006361:4574536:458656245865624587269708Nocardia farcinica IFM 10152, complete genomehypothetical protein7e-1994.4
NC_007333:1743890:184050018405001841237738Thermobifida fusca YX, complete genomeCRISPR-associated CT1976 family protein8e-1890.9
NC_018720:1812000:181630818163081817021714Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein Cas51e-1790.5
NC_015951:107360:109267109267110130864Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein Cas5 family1e-1790.1
NC_012590:977920:990201990201990917717Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein2e-1789.7
NC_013510:3117837:313465131346513135355705Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein Cas5 family3e-1789
NC_013131:4422000:443010544301054430842738Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein Cas5 family3e-1685.9
NC_015737:2146953:215817721581772158896720Clostridium sp. SY8519, complete genomehypothetical protein2e-1583.2
NC_007333:1743890:183106218310621831826765Thermobifida fusca YX, complete genomeCRISPR-associated CT1976 family protein3e-1582.8
NC_013159:1422370:143391014339101434620711Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated protein Cas54e-1582
NC_017186:6395435:644561064456106446320711Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein2e-1479.7
NC_014318:6395392:644556664455666446276711Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein2e-1479.7
NC_015170:54000:658756587566579705Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein Cas5 family1e-1377
NC_015387:942974:957079957079957744666Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas5 family8e-1270.9
NC_007775:723925:735589735589736212624Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein Cas5, Ecoli subtype4e-1168.9
NC_008609:2518993:252805925280592528757699Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein Cas5 family4e-1065.5
NC_010610:795975:812476812476813183708Lactobacillus fermentum IFO 3956, complete genomehypothetical protein9e-1064.3
NC_013890:1175931:118059511805951181212618Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated protein Cas5 family4e-0858.5
NC_007356:1165760:120474512047451205362618Dehalococcoides sp. CBDB1, complete genomehypothetical protein4e-0858.5
NC_002932:1851070:187538318753831876099717Chlorobium tepidum TLS, complete genomehypothetical protein3e-0755.8
NC_008526:343445:353626353626354336711Lactobacillus casei ATCC 334, complete genomeCRISPR-associated protein8e-0754.3
NC_015436:1287873:130012813001281300826699Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated protein Cas5 family2e-0653.5
NC_007643:185135:201892201892202677786Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated CT1976 family protein2e-0653.1