Pre_GI: BLASTP Hits

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Query: NC_008278:2972323:3013526 Frankia alni ACN14a, complete genome

Start: 3013526, End: 3014890, Length: 1365

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:3591401:3623160362316036244791320Kitasatospora setae KM-6054, complete genomehypothetical protein2e-37157
NC_014210:723719:7400287400287412421215Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein1e-36154
NC_013093:7437033:7455630745563074568261197Actinosynnema mirum DSM 43827, complete genomeintegrase family protein1e-35150
NC_015312:5579078:5594921559492155961471227Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeintegrase family protein9e-35148
NC_003155:4906639:4906639490663949079551317Streptomyces avermitilis MA-4680, complete genomephage-related integrase3e-33143
NC_014210:144036:1495391495391508071269Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein5e-31135
NC_008595:2215244:2220320222032022214681149Mycobacterium avium 104, complete genometraSA:integrase fusion protein2e-30133
NC_018750:2118907:2142090214209021433551266Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein4e-29129
NC_013757:3613438:363046536304653631445981Geodermatophilus obscurus DSM 43160, complete genome5e-29129
NC_015957:8777644:8782868878286887841331266Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase family protein1e-28128
NC_018750:3249756:3261997326199732632411245Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-28127
NC_008699:590000:5927985927985938831086Nocardioides sp. JS614, complete genomephage integrase family protein1e-26121
NC_008699:2418722:2443413244341324446001188Nocardioides sp. JS614, complete genomephage integrase family protein5e-26119
NC_008699:1816392:1833425183342518345611137Nocardioides sp. JS614, complete genomephage integrase family protein5e-26119
NC_008595:2252830:2270402227040222716101209Mycobacterium avium 104, complete genomephage-related integrase4e-25116
NC_013929:5952380:5954307595430759556141308Streptomyces scabiei 87.22 chromosome, complete genomephage integrase3e-24113
NC_018750:5293829:5316938531693853180921155Streptomyces venezuelae ATCC 10712, complete genomephage integrase family protein5e-24112
NC_013729:3573000:3593013359301335942241212Kribbella flavida DSM 17836, complete genomeintegrase family protein5e-24112
NC_014168:994640:1018282101828210195171236Segniliparus rotundus DSM 44985 chromosome, complete genomeintegrase family protein9e-24111
NC_015434:6020178:6042495604249560437331239Verrucosispora maris AB-18-032 chromosome, complete genomeintegrase family protein5e-23109
NC_008699:1132790:1159085115908511602361152Nocardioides sp. JS614, complete genomephage integrase family protein9e-23108
NC_003888:6103534:6133491613349161357972307Streptomyces coelicolor A3(2), complete genometraSA:integrase fusion protein4e-2099.8
NC_012522:4299287:4304961430496143060671107Rhodococcus opacus B4, complete genomeputative integrase1e-1998.6
NC_014550:2314359:2319179231917923202941116Arthrobacter arilaitensis Re117, complete genomeputative phage integrase1e-1998.2
NC_009077:4671417:4676733467673346780071275Mycobacterium sp. JLS, complete genomephage integrase family protein2e-1997.1
NC_019673:8348604:836580883658088366806999Saccharothrix espanaensis DSM 44229 complete genomePhage integrase4e-1893.2
NC_012522:5895946:5910225591022559116101386Rhodococcus opacus B4, complete genomephage integrase family protein6e-1892.4
NC_014814:1425500:1434223143422314354341212Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD7e-1892
NC_017955:1611037:1639314163931416404471134Modestobacter marinus, complete genomeintegrase, Lambda phage type1e-1688.2
NC_008705:3201817:3211232321123232124551224Mycobacterium sp. KMS, complete genomephage integrase family protein4e-1686.3
NC_008699:1673181:1714744171474417158501107Nocardioides sp. JS614, complete genomephage integrase family protein1e-1584.7
NC_015873:1193843:1212842121284212139181077Megasphaera elsdenii DSM 20460, complete genomesite-specific recombinase1e-1584.7
NC_013929:2375613:2400578240057824017981221Streptomyces scabiei 87.22 chromosome, complete genomephage integrase3e-1583.6
NC_015125:3284095:328857732885773289311735Microbacterium testaceum StLB037, complete genomeintegrase4e-1583.2
NC_016935:1636278:1644157164415716453111155Paenibacillus mucilaginosus 3016 chromosome, complete genometyrosine recombinase XerC5e-1582.8
NC_014318:6539137:655893065589306559769840Amycolatopsis mediterranei U32 chromosome, complete genomephage integrase family protein4e-1479.7
NC_017186:6539181:655897465589746559813840Amycolatopsis mediterranei S699 chromosome, complete genomephage integrase family protein4e-1479.7
NC_012815:1357003:1362381136238113634811101Bifidobacterium animalis subsp. lactis DSM 10140, complete genomephage-related integrase4e-1479.7
NC_012814:1357070:1362448136244813635481101Bifidobacterium animalis subsp. lactis Bl-04, complete genomephage-related integrase4e-1479.7
NC_011835:965977:9713559713559724551101Bifidobacterium animalis subsp. lactis AD011 chromosome, completephage-related integrase4e-1479.7
NC_017214:54558:6005060050611501101Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeDNA integration/recombination/inversion protein4e-1479.7
NC_017215:1361822:1367314136731413684141101Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,DNA integration/recombination/inversion protein4e-1479.7
NC_017216:1356930:1362308136230813634081101Bifidobacterium animalis subsp. lactis BLC1, complete genomephage integrase family protein4e-1479.7
NC_017217:1362573:1367951136795113690511101Bifidobacterium animalis subsp. lactis V9 chromosome, completephage-related integrase4e-1479.7
NC_009077:2308634:2313269231326923144351167Mycobacterium sp. JLS, complete genomephage integrase family protein5e-1479.3
NC_014391:6000834:6016628601662860177341107Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein1e-1378.2
NC_018750:4311300:4317107431710743183031197Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-1377.4
NC_015671:557720:5618825618825630091128Cellvibrio gilvus ATCC 13127 chromosome, complete genomeintegrase family protein6e-1375.9
NC_016948:3724390:3735349373534937365421194Mycobacterium intracellulare MOTT-64 chromosome, complete genomephage integrase family protein7e-1375.5
NC_019673:3041936:3044993304499330466181626Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-1275.1
NC_006087:885760:9005539005539017011149Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related integrase2e-1274.3
NC_008711:1892881:190429619042961905210915Arthrobacter aurescens TC1, complete genomephage integrase family domain protein6e-1272.4
NC_013510:39975:4285242852442071356Thermomonospora curvata DSM 43183, complete genomeintegrase family protein6e-1272.4
NC_015514:3508022:3525391352539135265331143Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase family protein1e-1171.6
NC_010511:4313769:4324122432412243252641143Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-1171.2
NC_003450:1903110:1985439198543919865901152Corynebacterium glutamicum ATCC 13032, complete genomeintegrase2e-1170.9
NC_003888:4377000:4390861439086143920001140Streptomyces coelicolor A3(2), complete genomeintegrase4e-1170.1
NC_014830:3438504:3462341346234134634681128Intrasporangium calvum DSM 43043 chromosome, complete genomeintegrase family protein3e-1170.1
NC_013929:5850599:585648058564805857370891Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1170.1
NC_014158:1479313:1490234149023414917631530Tsukamurella paurometabola DSM 20162 chromosome, complete genomeintegrase family protein4e-1169.7
NC_013929:5248000:5267167526716752683091143Streptomyces scabiei 87.22 chromosome, complete genomeprophage integrase7e-1168.9
NC_013929:3600343:3617834361783436190571224Streptomyces scabiei 87.22 chromosome, complete genomeintegrase3e-1067
NC_016812:463000:4764544764544776591206Sinorhizobium fredii HH103, complete genometyrosine recombinase XerD1e-0964.7
NC_008146:5106775:5111630511163051129311302Mycobacterium sp. MCS, complete genomephage integrase2e-0964.3
NC_018750:4333064:4333064433306443342091146Streptomyces venezuelae ATCC 10712, complete genomeintegrase2e-0963.9
NC_008705:5144433:5149414514941451505891176Mycobacterium sp. KMS, complete genome2e-0963.9
NC_014391:1910273:1918870191887019200061137Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein2e-0963.9
NC_008726:4672850:4680971468097146820921122Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein7e-0962.4
NC_003155:4592000:4614801461480146159401140Streptomyces avermitilis MA-4680, complete genomeintegrase8e-0962.4
NC_019673:1420198:1436171143617114374091239Saccharothrix espanaensis DSM 44229 complete genomeIntegrase1e-0861.2
NC_014830:3275474:3280621328062132817451125Intrasporangium calvum DSM 43043 chromosome, complete genomeintegrase family protein2e-0860.8
NC_011757:3486283:3510069351006935111901122Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein3e-0860.5
NC_016799:167362:1771171771171783431227Corynebacterium diphtheriae 31A chromosome, complete genomeputative phage integrase3e-0860.1
NC_020410:1123121:112994211299421130733792Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeDNA integration/recombination/invertion protein4e-0859.7
NC_016906:3286384:3302810330281033039911182Gordonia polyisoprenivorans VH2 chromosome, complete genomeprophage integrase6e-0859.3
NC_013441:1487058:1489298148929814904701173Gordonia bronchialis DSM 43247, complete genomeintegrase family protein5e-0859.3
NC_018750:2270314:2277354227735422786461293Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-0758.5
NC_013170:311045:3463313463313474761146Cryptobacterium curtum DSM 15641, complete genomesite-specific recombinase XerC1e-0758.2
NC_014211:439611:4559724559724571711200Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidintegrase family protein7e-0755.8
NC_021177:3598700:3610088361008836116111524Streptomyces fulvissimus DSM 40593, complete genomeLacI family transcription regulator8e-0755.5
NC_003888:4613000:461943246194324620040609Streptomyces coelicolor A3(2), complete genomeintegrase, partial CDS8e-0755.5
NC_012490:3094857:3112718311271831138811164Rhodococcus erythropolis PR4, complete genomeintegrase1e-0655.1
NC_014963:113015:1335471335471347311185Terriglobus saanensis SP1PR4 chromosome, complete genomeintegrase family protein2e-0654.3
NC_014169:231210:2508572508572522241368Bifidobacterium longum subsp. longum JDM301 chromosome, completephage integrase family protein4e-0653.1
NC_015656:454500:466640466640467551912Frankia symbiont of Datisca glomerata chromosome, complete genome6e-0652.4
NC_011959:131800:133752133752134702951Thermomicrobium roseum DSM 5159, complete genometransposase7e-0652.4