Pre_GI: BLASTP Hits

Some Help

Query: NC_008278:2863355:2872015 Frankia alni ACN14a, complete genome

Start: 2872015, End: 2872626, Length: 612

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014666:4043279:406098240609824061575594Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR4e-1167.8
NC_014844:1270618:131264813126481313235588Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeregulatory protein TetR6e-1167.4
NC_019697:4108944:412618041261804126779600Chamaesiphon minutus PCC 6605, complete genometranscriptional regulator6e-1063.9
NC_014640:4193193:420211042021104202850741Achromobacter xylosoxidans A8 chromosome, complete genomeTetR family transcriptional regulator7e-1063.9
NC_007333:1677406:169512416951241695765642Thermobifida fusca YX, complete genomehypothetical protein5e-0857.8
NC_014666:2629799:264785226478522648499648Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR7e-0857
NC_014391:2579919:260588226058822606496615Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein TetR1e-0756.6
NC_008278:3601959:360548336054833606088606Frankia alni ACN14a, complete genomeputative PhlF, transcriptional repressor of 2, 4-DAPG biosynthesis, TetR family1e-0756.6
NC_012881:964823:984775984775985365591Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, TetR family2e-0755.8
NC_009921:8717659:873679087367908737359570Frankia sp. EAN1pec, complete genome3e-0755.1
NC_009832:5369566:537054053705405371169630Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family6e-0753.9
NC_018750:8210500:821132182113218211944624Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, TetR family7e-0753.9
NC_017904:2379387:241830524183052418841537Mycobacterium sp. MOTT36Y chromosome, complete genomeregulatory protein7e-0753.9
NC_016582:10287865:103050321030503210305622591Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator3e-0651.6
NC_007777:2638580:266374526637452664266522Frankia sp. CcI3, complete genometranscriptional regulator, TetR family8e-0650.4
NC_011891:3369170:338864133886413389216576Anaeromyxobacter dehalogenans 2CP-1, complete genomeregulatory protein TetR9e-0650.1