Pre_GI: BLASTP Hits

Some Help

Query: NC_008278:175500:193282 Frankia alni ACN14a, complete genome

Start: 193282, End: 195591, Length: 2310

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009142:5647737:5652066565206656544082343Saccharopolyspora erythraea NRRL 2338, complete genomeprotein kinase/transcriptional regulator, LuxR family2e-115417
NC_012522:3224526:3224526322452632277893264Rhodococcus opacus B4, complete genomeputative serine/threonine protein kinase8e-97355
NC_007777:1170406:1178211117821111806552445Frankia sp. CcI3, complete genometranscriptional regulator, LuxR family2e-90334
NC_003888:1395319:1406138140613814084802343Streptomyces coelicolor A3(2), complete genomemulti-domain regulatory protein8e-89328
NC_012522:3224526:3240223324022332430362814Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator2e-88327
NC_008271:35909:5350253502567713270Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprotein kinase/ transcriptional regulator, LuxR family1e-86322
NC_008268:5745620:5761830576183057645022673Rhodococcus sp. RHA1, complete genomepossible transcriptional regulator, LuxR family2e-84314
NC_012522:98567:1091781091781114962319Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator3e-84313
NC_008268:3418000:3423885342388534257231839Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator, LuxR family5e-78293
NC_015848:2859145:2865525286552528688693345Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional regulatory protein1e-64248
NC_019950:2830682:2837062283706228404063345Mycobacterium canettii CIPT 140060008 complete genomePutative LuxR family transcriptional regulator1e-64248
NC_009565:2806000:2810784281078428141973414Mycobacterium tuberculosis F11, complete genomehypothetical transcriptional regulatory protein, luxR-family1e-63245
NC_009525:2802987:2809435280943528128483414Mycobacterium tuberculosis H37Ra, complete genomeLuxR family transcriptional regulator1e-63245
NC_002945:2757821:2764268276426827676813414Mycobacterium bovis AF2122/97, complete genomeLuxR family transcriptional regulator1e-63245
NC_000962:2791019:2797467279746728008803414Mycobacterium tuberculosis H37Rv, complete genomePROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (LUXR-FAMILY)1e-63245
NC_002755:2788000:2792955279295527962963342Mycobacterium tuberculosis CDC1551, complete genometranscriptional regulator, LuxR family9e-64245
NC_016804:2735897:2740639274063927440523414Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transcriptional regulatory protein, LuxR family2e-63244
NC_012207:2747599:2754045275404527574583414Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transcriptional regulatory protein2e-63244
NC_008769:2754828:2761274276127427646873414Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transcriptional regulatory protein (luxR-family)2e-63244
NC_014318:6395392:6399946639994664026392694Amycolatopsis mediterranei U32 chromosome, complete genomepredicted ATPase4e-63243
NC_017186:6395435:6399989639998964021722184Amycolatopsis mediterranei S699 chromosome, complete genomeATPase6e-63242
NC_019673:4687289:4697284469728447004093126Saccharothrix espanaensis DSM 44229 complete genomeProtein kinase2e-57224
NC_006087:2214209:2232154223215422344032250Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LuxR family4e-56220
NC_013235:5849659:5871616587161658748973282Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, winged helix family3e-53210
NC_014815:2055286:2070183207018320734463264Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, winged helix family7e-49196
NC_019673:3253650:3276007327600732792493243Saccharothrix espanaensis DSM 44229 complete genomeATPase-like protein4e-48193
NC_016111:3577572:3599142359914236023393198Streptomyces cattleya NRRL 8057, complete genomeAfsR-like regulatory protein5e-48193
NC_013159:3858425:3858425385842538616073183Saccharomonospora viridis DSM 43017, complete genomepredicted ATPase9e-48192
NC_007510:1959883:1998966199896620015992634Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, winged helix family2e-47191
NC_013757:2659930:2674458267445826773312874Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, winged helix family3e-47190
NC_016627:3659500:3671029367102936744903462Clostridium clariflavum DSM 19732 chromosome, complete genomeputative ATPase3e-46187
NC_014100:449541:4747094747094775672859Caulobacter segnis ATCC 21756 chromosome, complete genomewinged helix family transcriptional regulator1e-45185
NC_013757:1732747:1743495174349517463262832Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, winged helix family2e-44181
NC_015379:4426827:4424076442407644268652790Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, unclassified2e-43177
NC_016582:6999074:7026400702640070305004101Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAfsR-like regulatory protein8e-43176
NC_009485:1946000:1956702195670219596202919Bradyrhizobium sp. BTAi1 chromosome, complete genometranscriptional regulator4e-42173
NC_016943:1314500:1314500131450013177873288Blastococcus saxobsidens DD2, complete genomeMulti-domain regulatory protein9e-40166
NC_020453:7826358:7855205785520578580932889Agromonas oligotrophica S58 DNA, complete genomeputative ATPase1e-39165
NC_013947:460398:4835324835324866183087Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, winged helix family3e-39164
NC_014217:1352777:1360468136046813633112844Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, winged helix family2e-38161
NC_018681:5490963:5520274552027455227752502Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein3e-37157
NC_007492:6372900:6402638640263864054902853Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, Winged helix family6e-37156
NC_011666:2335765:2355909235590923587662858Methylocella silvestris BL2, complete genome1e-36155
NC_013947:3534209:3536416353641635391752760Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LuxR family2e-36154
NC_011831:853433:8542868542868566252340Chloroflexus aggregans DSM 9485, complete genometranscriptional regulator, XRE family2e-32141
NC_010512:110932:1170741170741185551482Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, winged helix family2e-32141
NC_014100:2782000:2782139278213927849822844Caulobacter segnis ATCC 21756 chromosome, complete genomewinged helix family transcriptional regulator3e-32140
NC_009767:4819000:4837476483747648406703195Roseiflexus castenholzii DSM 13941, complete genometranscriptional regulator, SARP family5e-29130
NC_015312:61752:7863778637814442808Pseudonocardia dioxanivorans CB1190 chromosome, complete genomewinged helix family transcriptional regulator2e-28128
NC_015711:3697808:3715641371564137188173177Myxococcus fulvus HW-1 chromosome, complete genomeadenylate/guanylate cyclase domain-containing protein8e-25116
NC_015379:4426827:4426827442682744283141488Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, unclassified1e-24115
NC_010676:3009980:3009980300998030114941515Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, winged helix family4e-24114
NC_013947:3785332:3786080378608037888242745Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LuxR family3e-24114
NC_015671:3211972:3226190322619032294293240Cellvibrio gilvus ATCC 13127 chromosome, complete genometranscriptional regulator, winged helix family2e-1688.2
NC_020302:2116468:2137332213733221388551524Corynebacterium halotolerans YIM 70093 = DSM 44683, completeATPase-like protein2e-1481.6
NC_018750:3661243:3681256368125636826591404Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein7e-1376.6
NC_009664:4377777:439903043990304399665636Kineococcus radiotolerans SRS30216, complete genometwo component transcriptional regulator, LuxR family3e-0964.7
NC_008321:2649781:265542726554272656092666Shewanella sp. MR-4, complete genometwo component transcriptional regulator, LuxR family1e-0862.4
NC_008322:2716676:272338927233892724054666Shewanella sp. MR-7, complete genometwo component transcriptional regulator, LuxR family1e-0862.4
NC_009142:6199326:6200823620082362036542832Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, LuxR family2e-0862
NC_015953:6212366:624157962415796242253675Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator2e-0862
NC_016113:11500:312023120231861660Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator3e-0861.2
NC_016582:6811273:681717068171706817877708Streptomyces bingchenggensis BCW-1 chromosome, complete genometwo component LuxR family transcriptional regulator3e-0861.2
NC_003272:2560329:256736625673662567995630Nostoc sp. PCC 7120, complete genometwo-component response regulator5e-0860.5
NC_014614:2434017:245401924540192454687669Clostridium sticklandii, complete genomeputative transcriptional regulator YhcZ9e-0859.7
NC_016582:6811273:682559468255946826280687Streptomyces bingchenggensis BCW-1 chromosome, complete genometwo component LuxR family transcriptional regulator1e-0759.3
NC_015953:2059083:207917620791762079865690Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator1e-0759.3
NC_003155:7979050:798241379824137983084672Streptomyces avermitilis MA-4680, complete genometwo-component system response regulator1e-0758.9
NC_014391:3445672:346042434604243461083660Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeresponse regulator receiver2e-0758.9
NC_003888:1751179:176915617691561769827672Streptomyces coelicolor A3(2), complete genometwo-component response regulator2e-0758.9
NC_021177:5697210:572003157200315720681651Streptomyces fulvissimus DSM 40593, complete genomechitinase two-component response regulator2e-0758.5
NC_013595:1851226:186206318620631862716654Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein2e-0758.5
NC_013929:8106492:811467981146798115350672Streptomyces scabiei 87.22 chromosome, complete genometwo-component response regulator2e-0758.5
NC_019771:1356000:136497313649731365605633Anabaena cylindrica PCC 7122, complete genometwo component transcriptional regulator, LuxR family2e-0758.2
NC_015953:4746983:477037547703754771031657Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator3e-0757.8
NC_021177:2185898:220579222057922206481690Streptomyces fulvissimus DSM 40593, complete genomeTwo component transcriptional regulator, LuxR family3e-0757.8
NC_010162:7620000:762793276279327628660729Sorangium cellulosum 'So ce 56', complete genometwo-component system response regulator3e-0757.8
NC_014209:1487699:150389515038951504512618Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,two component transcriptional regulator, LuxR family5e-0757.4
NC_016935:1868839:191055419105541911225672Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-0757.4
NC_018750:1591895:160845116084511609095645Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system response regulator4e-0757.4
NC_014363:114239:142838142838143575738Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, LuxR family5e-0757
NC_015957:8569721:859217685921768592853678Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLuxR family two component transcriptional regulator5e-0757
NC_017955:3731480:374356537435653744257693Modestobacter marinus, complete genometwo-component response regulator6e-0757
NC_008699:1067855:107178610717861072442657Nocardioides sp. JS614, complete genomeresponse regulator receiver7e-0756.6
NC_010407:2406113:242079324207932421491699Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative two component system response regulator7e-0756.6
NC_016614:1152500:117034811703481171028681Vibrio sp. EJY3 chromosome 2, complete sequencetranscriptional regulator NarL7e-0756.6
NC_018720:2000028:200358920035892004263675Bifidobacterium asteroides PRL2011 chromosome, complete genometwo component transcriptional regulator, LuxR family6e-0756.6
NC_018750:1390029:139943613994361400113678Streptomyces venezuelae ATCC 10712, complete genomeDNA-binding response regulator, LuxR family9e-0756.2
NC_006177:520055:533611533611534207597Symbiobacterium thermophilum IAM 14863, complete genometwo-component response regulator1e-0656.2
NC_013093:2471574:2482116248211624849862871Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, LuxR family1e-0655.8
NC_009921:3999040:401613540161354016815681Frankia sp. EAN1pec, complete genometwo component transcriptional regulator, LuxR family1e-0655.8
NC_016943:3270308:331886433188643319514651Blastococcus saxobsidens DD2, complete genomeResponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain1e-0655.8
NC_016109:8256000:8273040827304082759162877Kitasatospora setae KM-6054, complete genomeputative LuxR family transcriptional regulator1e-0655.8
NC_014147:765941:769906769906770562657Moraxella catarrhalis RH4 chromosome, complete genometwo-component system nitrate/nitrite response regulator NarL1e-0655.8
NC_018750:5399316:541400954140095414662654Streptomyces venezuelae ATCC 10712, complete genomeDNA-binding response regulator, LuxR family1e-0655.8
NC_019902:97987:979879798798592606Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative LuxR-family transcriptional regulator2e-0655.5
NC_013947:656140:661578661578662228651Stackebrandtia nassauensis DSM 44728 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0655.1
NC_006087:2008000:201252920125292013200672Leifsonia xyli subsp. xyli str. CTCB07, complete genometwo-component system, regulatory protein2e-0655.1
NC_014562:2563466:257057225705722571219648Pantoea vagans C9-1 chromosome, complete genomeNitrate/nitrite response regulator protein2e-0655.1
NC_009142:5459819:546660054666005466854255Saccharopolyspora erythraea NRRL 2338, complete genomeprobable transcriptional regulator, LuxR family2e-0655.1
NC_014640:76992:7758477584790831500Achromobacter xylosoxidans A8 chromosome, complete genomesensory box protein 12e-0655.1
NC_016830:3697173:370346837034683703962495Pseudomonas fluorescens F113 chromosome, complete genomeLuxR family transcriptional regulator2e-0655.1
NC_004129:3123000:312730831273083128099792Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LuxR family3e-0654.7
NC_008027:3844355:386445738644573865245789Pseudomonas entomophila L48, complete genometranscriptional regulator, LuxR family3e-0654.3
NC_007513:1764739:178662817866281786858231Synechococcus sp. CC9902, complete genometranscriptional regulator, LuxR family3e-0654.3
NC_013757:729986:750149750149750961813Geodermatophilus obscurus DSM 43160, complete genometwo component transcriptional regulator, LuxR family5e-0653.9
NC_008278:4023918:405790440579044058539636Frankia alni ACN14a, complete genomeputative two-component system response regulator4e-0653.9
NC_015379:3175500:318305931830593183796738Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative response regulator, NarL family4e-0653.9
NC_012526:2483000:250248225024822503132651Deinococcus deserti VCD115, complete genomeputative response regulator, NarL7e-0653.1
NC_013235:593289:606074606074606721648Nakamurella multipartita DSM 44233, complete genometwo component transcriptional regulator, LuxR family7e-0653.1
NC_016109:5543112:556083555608355561503669Kitasatospora setae KM-6054, complete genomeputative two-component system response regulator8e-0653.1
NC_008319:962968:101314410131441013848705Synechococcus sp. CC9311, complete genomeDNA-binding response regulator1e-0552.8
NC_013159:3554389:355845635584563559106651Saccharomonospora viridis DSM 43017, complete genomeresponse regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein1e-0552.8
NC_013757:3613438:361555236155523616298747Geodermatophilus obscurus DSM 43160, complete genometwo component transcriptional regulator, LuxR family1e-0552.8