Pre_GI: BLASTP Hits

Some Help

Query: NC_008269:868000:893889 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 893889, End: 894068, Length: 180

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010515:1375091:141137714113771411595219Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence4-oxalocrotonate tautomerase5e-1373.2
NC_010552:335989:349822349822350040219Burkholderia ambifaria MC40-6 chromosome 2, complete sequence4-oxalocrotonate tautomerase5e-1372.8
NC_008545:115292:123216123216123434219Burkholderia cenocepacia HI2424 plasmid 1, complete sequence9e-1372.4
NC_008061:2153495:216629421662942166512219Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence4-oxalocrotonate tautomerase9e-1372.4
NC_008543:90312:103261103261103479219Burkholderia cenocepacia HI2424 chromosome 2, complete sequence4-oxalocrotonate tautomerase9e-1372.4
NC_004578:4781326:479790447979044798122219Pseudomonas syringae pv. tomato str. DC3000, complete genome4-oxalocrotonate tautomerase family protein3e-0960.5