Pre_GI: BLASTP Hits

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Query: NC_008269:577111:583510 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 583510, End: 584616, Length: 1107

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014159:37920:548765487655859984Tsukamurella paurometabola DSM 20162 plasmid pTpau01, completeputative recombinase1e-21103
NC_013441:5025444:504212750421275043071945Gordonia bronchialis DSM 43247, complete genomehypothetical protein5e-1168.9