Pre_GI: BLASTP Hits

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Query: NC_008269:577111:579558 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 579558, End: 580478, Length: 921

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009339:274428:275102275102276031930Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencecobyrinic acid a,c-diamide synthase4e-80298
NC_008537:130278:140897140897141838942Arthrobacter sp. FB24 plasmid 1, complete sequenceCobyrinic acid a,c-diamide synthase5e-32138
NC_012520:1:144061440615374969Rhodococcus opacus B4 plasmid pROB01, complete sequenceputative Soj/ParA-related protein5e-24112
NC_011881:46654:530785307854049972Arthrobacter chlorophenolicus A6 plasmid pACHL02, completeCobyrinic acid ac-diamide synthase3e-22105
NC_011355:1:291329133893981Mycobacterium liflandii 128FXT plasmid pMUM002, complete sequencechromosome partitioning protein2e-1686.7
NC_001732:10678:280692806928848780Methanocaldococcus jannaschii DSM 2661 extrachromosomal, completeputative chromosome partitioning protein1e-0654.3