Query: NC_008268:6149576 Rhodococcus sp. RHA1, complete genome
Start: 6149576, End: 6176842, Length: 27267
Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_004369:1051013* | 1051013 | 1073859 | 22847 | Corynebacterium efficiens YS-314, complete genome | 1e-82 | 315 | BLASTN svg | BLASTP svg |
| NC_009664:1195630* | 1195630 | 1226374 | 30745 | Kineococcus radiotolerans SRS30216, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
| NC_008596:6009511 | 6009511 | 6053826 | 44316 | Mycobacterium smegmatis str. MC2 155, complete genome | 1e-27 | 133 | BLASTN svg | BLASTP svg |
| NC_014550:889500 | 889500 | 915783 | 26284 | Arthrobacter arilaitensis Re117, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_013947:1363078* | 1363078 | 1381389 | 18312 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_013757:368973 | 368973 | 412302 | 43330 | Geodermatophilus obscurus DSM 43160, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_014158:73344 | 73344 | 93838 | 20495 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_012590:977920 | 977920 | 999928 | 22009 | Corynebacterium aurimucosum ATCC 700975, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_005070:904751* | 904751 | 967519 | 62769 | Synechococcus sp. WH 8102, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009439:1174432* | 1174432 | 1199736 | 25305 | Pseudomonas mendocina ymp, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |