Pre_GI: BLASTN Hits

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Query: NC_008268:1748635 Rhodococcus sp. RHA1, complete genome

Start: 1748635, End: 1772396, Length: 23762

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013855:56344563447459918256Azospirillum sp. B510 plasmid pAB510a, complete sequence8e-19103BLASTN svgBLASTP svg
NC_013854:1277106*1277106129609918994Azospirillum sp. B510, complete genome8e-19103BLASTN svgBLASTP svg
NC_007651:72952*7295214574172790Burkholderia thailandensis E264 chromosome I, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_010424:531727*53172755409922373Candidatus Desulforudis audaxviator MP104C, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013131:2517861*2517861253698619126Catenulispora acidiphila DSM 44928, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013223:11885001188500121591227413Desulfohalobium retbaense DSM 5692, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009778:17174581717458175914341686Enterobacter sakazakii ATCC BAA-894, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002655:11039911103991112782323833Escherichia coli O157:H7 EDL933, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009921:34199783419978344561625639Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014973:34521003452100349125939160Geobacter sp. M18 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013757:78083578083581363532801Geodermatophilus obscurus DSM 43160, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_003901:35915003591500361009918600Methanosarcina mazei Go1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006361:5146000*5146000517359927600Nocardia farcinica IFM 10152, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_006361:31320003132000316145129452Nocardia farcinica IFM 10152, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018524:2246225*2246225228118534961Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_009439:4404942*4404942442988324942Pseudomonas mendocina ymp, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015312:67179736717973673763819666Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012490:44254564425456444448419029Rhodococcus erythropolis PR4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012522:985679856712209923533Rhodococcus opacus B4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012522:3867167*3867167389736130195Rhodococcus opacus B4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012522:78370717837071785964122571Rhodococcus opacus B4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008269:42889842889845259923702Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_008268:71806637180663722188141219Rhodococcus sp. RHA1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009142:2480608*2480608252218941582Saccharopolyspora erythraea NRRL 2338, complete genome6e-29137BLASTN svgBLASTP svg
NC_009142:5647737*5647737567459926863Saccharopolyspora erythraea NRRL 2338, complete genome3e-18101BLASTN svgBLASTP svg
NC_019673:6362458*6362458639102228565Saccharothrix espanaensis DSM 44229 complete genome7e-44186BLASTN svgBLASTP svg
NC_021177:21858982185898220648120584Streptomyces fulvissimus DSM 40593, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015953:20590832059083208140822326Streptomyces sp. SirexAA-E chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015957:85697218569721859285323133Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013510:2782240*2782240280526223023Thermomonospora curvata DSM 43183, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013510:1849751*1849751187248222732Thermomonospora curvata DSM 43183, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015434:23754392375439239859923161Verrucosispora maris AB-18-032 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg