Pre_GI: BLASTP Hits

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Query: NC_008268:7052202:7067091 Rhodococcus sp. RHA1, complete genome

Start: 7067091, End: 7068638, Length: 1548

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016801:2271779:2284410228441022859601551Corynebacterium diphtheriae C7 (beta) chromosome, complete genomepropionyl-CoA carboxylase complex B subunit3e-144512
NC_016785:2215732:2229971222997122315211551Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit3e-144512
NC_016799:2303500:2313894231389423154441551Corynebacterium diphtheriae 31A chromosome, complete genomepropionyl-CoA carboxylase complex B subunit9e-144510
NC_016786:2199500:2210616221061622121661551Corynebacterium diphtheriae HC01 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit1e-143510
NC_016782:2199000:2210017221001722115671551Corynebacterium diphtheriae 241 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit1e-143510
NC_016788:2265792:2279663227966322812131551Corynebacterium diphtheriae HC04 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit2e-143509
NC_016789:2281180:2295240229524022967901551Corynebacterium diphtheriae PW8 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit2e-143509
NC_016783:2212341:2225122222512222266721551Corynebacterium diphtheriae INCA 402 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit3e-143508
NC_016790:2166000:2176839217683921783891551Corynebacterium diphtheriae VA01 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit9e-143507
NC_006085:1859191:1860626186062618622001575Propionibacterium acnes KPA171202, complete genomepropionyl-CoA carboxylase beta chain9e-131467
NC_014039:1813205:1814640181464018162141575Propionibacterium acnes SK137 chromosome, complete genomecarboxyl transferase domain protein1e-130467
NC_016511:1811171:1812606181260618141801575Propionibacterium acnes TypeIA2 P.acn31 chromosome, completepropionyl-CoA carboxylase subunit beta8e-130464
NC_016512:1810625:1812060181206018136341575Propionibacterium acnes TypeIA2 P.acn17 chromosome, completepropionyl-CoA carboxylase subunit beta8e-130464
NC_016516:1799521:1803516180351618050901575Propionibacterium acnes TypeIA2 P.acn33 chromosome, completepropionyl-CoA carboxylase subunit beta8e-130464
NC_017955:4746441:4763044476304447646721629Modestobacter marinus, complete genomepropionyl-CoA carboxylase subunit beta6e-130464
NC_016800:2239626:2252765225276522540661302Corynebacterium diphtheriae BH8 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit1e-128460
NC_016787:2245000:2255846225584622571471302Corynebacterium diphtheriae HC03 chromosome, complete genomepropionyl-CoA carboxylase complex B subunit4e-127455
NC_008269:868000:8859328859328875721641Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencepropionyl-CoA carboxylase beta subunit8e-124444
NC_008726:1776192:1779361177936117809891629Mycobacterium vanbaalenii PYR-1, complete genomecarboxyl transferase7e-123441
NC_014814:4326500:4340432434043243420571626Mycobacterium sp. Spyr1 chromosome, complete genomeacetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)8e-123441
NC_014297:1282302:1299574129957413011361563Halalkalicoccus jeotgali B3 chromosome, complete genomecarboxyl transferase3e-115416
NC_009922:490500:4965854965854981321548Alkaliphilus oremlandii OhILAs, complete genomecarboxyl transferase6e-115414
NC_003228:3645426:3645956364595636475091554Bacteroides fragilis NCTC 9343, complete genomeputative methylmalonyl-CoA decarboxylase, alpha-subunit1e-114413
NC_016776:3691453:3691453369145336930061554Bacteroides fragilis 638R, complete genomeputative methylmalonyl-CoA decarboxylase, alpha-subunit2e-114413
NC_006347:3735887:3738293373829337398461554Bacteroides fragilis YCH46, complete genomepropionyl-CoA carboxylase beta chain2e-114413
NC_013642:505518:5126065126065141531548Thermotoga naphthophila RKU-10, complete genomecarboxyl transferase2e-114412
NC_011978:1812000:1824726182472618262731548Thermotoga neapolitana DSM 4359, complete genomePropionyl-CoA carboxylase, beta subunit2e-113410
NC_011565:750168:7618127618127633651554Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative methylmalonyl-CoA decarboxylase alpha subunit1e-112407
NC_014735:1:2879428794303381545Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completepropionyl-CoA carboxylase carboxyltransferase subunit3e-112405
NC_015571:722815:7243067243067258591554Porphyromonas gingivalis TDC60, complete genomemethylmalonyl-CoA decarboxylase subunit alpha1e-111404
NC_015164:3431279:3455682345568234572351554Bacteroides salanitronis DSM 18170 chromosome, complete genomePropionyl-CoA carboxylase2e-111403
NC_020134:1173000:1190557119055711921071551Clostridium stercorarium subsp. stercorarium DSM 8532, completepropionyl-CoA carboxylase beta chain1e-110400
NC_019908:2068631:2105328210532821068721545Brachyspira pilosicoli P43/6/78 chromosome, complete genomeacetyl-CoA carboxylase subunit alpha1e-110400
NC_019964:1873167:1896389189638918979331545Halovivax ruber XH-70, complete genomeacetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)6e-110398
NC_019942:987134:1055625105562510571511527Aciduliprofundum sp. MAR08-339, complete genomeacetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)6e-109395
NC_014758:579741:5868935868935884371545Calditerrivibrio nitroreducens DSM 19672 chromosome, completepropionyl-CoA carboxylase carboxyltransferase subunit4e-109395
NC_015958:2361551:2366472236647223680221551Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomecarboxyl transferase3e-109395
NC_010320:819326:8313498313498328991551Thermoanaerobacter sp. X514 chromosome, complete genomecarboxyl transferase6e-109394
NC_000868:834872:8545458545458561131569Pyrococcus abyssi GE5, complete genomemethylmalonyl-CoA decarboxylase, subunit alpha1e-108394
NC_009718:1411793:1423606142360614251441539Fervidobacterium nodosum Rt17-B1, complete genomecarboxyl transferase2e-108393
NC_015437:572788:5748285748285763571530Selenomonas sputigena ATCC 35185 chromosome, complete genomePropionyl-CoA carboxylase2e-108393
NC_012225:2333500:2346565234656523481091545Brachyspira hyodysenteriae WA1, complete genomeAcetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)5e-108392
NC_007797:411630:4300724300724316011530Anaplasma phagocytophilum HZ, complete genomepropionyl-CoA carboxylase, beta subunit5e-108392
NC_019968:8397:2754727547291121566Prevotella dentalis DSM 3688 chromosome 2, complete sequenceacetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)1e-107390
NC_014633:837588:8670288670288685811554Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencecarboxyl transferase8e-107387
NC_011026:3009500:3039319303931930408751557Chloroherpeton thalassium ATCC 35110, complete genomecarboxyl transferase3e-106385
NC_013730:1948484:1964214196421419657821569Spirosoma linguale DSM 74, complete genomecarboxyl transferase9e-105380
NC_015873:1193843:1209996120999612115251530Megasphaera elsdenii DSM 20460, complete genomecarboxyl transferase domain protein1e-104380
NC_006347:4031000:4037820403782040393551536Bacteroides fragilis YCH46, complete genomepropionyl-CoA carboxylase beta chain3e-104379
NC_015555:277364:2830482830482845981551Thermoanaerobacterium xylanolyticum LX-11 chromosome, completePropionyl-CoA carboxylase4e-104378
NC_016776:3973428:3980233398023339817681536Bacteroides fragilis 638R, complete genomeputative carboxyl transferase5e-104378
NC_003228:3934770:3941575394157539431101536Bacteroides fragilis NCTC 9343, complete genomeputative carboxyl transferase5e-104378
NC_014212:3206860:3212275321227532138401566Meiothermus silvanus DSM 9946 chromosome, complete genomecarboxyl transferase2e-102373
NC_017059:376226:3888323888323903641533Rhodospirillum photometricum DSM 122, complete genomeCarboxyl transferase2e-102373
NC_016620:3259749:3270631327063132722231593Bacteriovorax marinus SJ, complete genomeputative propionyl-CoA carboxylase5e-102372
NC_015164:890955:8937798937798953111533Bacteroides salanitronis DSM 18170 chromosome, complete genomePropionyl-CoA carboxylase6e-102371
NC_012808:157156:1835281835281850601533Methylobacterium extorquens AM1, complete genomepropionyl-CoA carboxylase beta chain2e-101370
NC_010003:605961:6073676073676089231557Petrotoga mobilis SJ95, complete genomecarboxyl transferase4e-101369
NC_014206:1202907:1202907120290712044571551Geobacillus sp. C56-T3 chromosome, complete genomecarboxyl transferase1e-100367
NC_014654:2277461:2277461227746122790111551Halanaerobium sp. 'sapolanicus' chromosome, complete genomecarboxyl transferase2e-100367
NC_013446:2655955:2655955265595526574901536Comamonas testosteroni CNB-2, complete genomecarboxyl transferase5e-100365
NC_011992:1968258:1971471197147119730031533Acidovorax ebreus TPSY, complete genomecarboxyl transferase5e-100365
NC_007333:1411050:1417529141752914190881560Thermobifida fusca YX, complete genomemethylmalonyl-CoA decarboxylase alpha chain1e-99364
NC_015500:1204501:1227567122756712290541488Treponema brennaborense DSM 12168 chromosome, complete genomePropionyl-CoA carboxylase4e-99362
NC_007798:703922:7065237065237080791557Neorickettsia sennetsu str. Miyayama, complete genomepropionyl-CoA carboxylase, beta subunit2e-97357
NC_012588:211633:2178792178792194501572Sulfolobus islandicus M.14.25 chromosome, complete genomecarboxyl transferase2e-97356
NC_013009:721823:7244907244907259891500Neorickettsia risticii str. Illinois, complete genomepropionyl-CoA carboxylase beta chain6e-97355
NC_011146:382719:4114694114694130131545Geobacter bemidjiensis Bem, complete genomecarboxyl transferase2e-96353
NC_015573:813000:8481768481768497171542Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomePropionyl-CoA carboxylase2e-92340
NC_010162:2406976:2423070242307024246321563Sorangium cellulosum 'So ce 56', complete genomeAcyl-CoA carboxylase subunit1e-73278
NC_013791:2273389:2282711228271122842401530Bacillus pseudofirmus OF4 chromosome, complete genomepropionyl-CoA carboxylase7e-73275
NC_002570:1220180:1232564123256412340781515Bacillus halodurans C-125, complete genomepropionyl-CoA carboxylase4e-73275
NC_021171:1689518:1700285170028517018981614Bacillus sp. 1NLA3E, complete genomepropionyl-CoA carboxylase1e-68261
NC_016584:4325964:4338636433863643401651530Desulfosporosinus orientis DSM 765 chromosome, complete genomeacetyl-CoA carboxylase, carboxyl transferase subunit alpha9e-64244
NC_018681:2447871:2474300247430024757331434Nocardia brasiliensis ATCC 700358 chromosome, complete genomePropionyl-CoA carboxylase beta subunit2e-61236
NC_013411:3010000:3029472302947230310191548Geobacillus sp. Y412MC61, complete genomecarboxyl transferase3e-57223
NC_014915:2149884:2169404216940421709511548Geobacillus sp. Y412MC52 chromosome, complete genomecarboxyl transferase3e-57223
NC_016943:4194002:4232776423277642343411566Blastococcus saxobsidens DD2, complete genomemethylmalonyl-CoA carboxytransferase2e-54213
NC_007760:535825:5459385459385476621725Anaeromyxobacter dehalogenans 2CP-C, complete genomePropionyl-CoA carboxylase1e-53211
NC_010814:3474856:3492289349228934940131725Geobacter lovleyi SZ, complete genomePropionyl-CoA carboxylase2e-52206
NC_016943:4194002:4246676424667642482081533Blastococcus saxobsidens DD2, complete genomeputative Propionyl-CoA carboxylase6e-51202
NC_007802:1093785:1105992110599211075181527Jannaschia sp. CCS1, complete genomePropionyl-CoA carboxylase2e-46187
NC_008268:5745620:5747642574764257508243183Rhodococcus sp. RHA1, complete genomecarboxylase/ CoA carboxylase3e-46186
NC_008313:2142397:2143643214364321452501608Ralstonia eutropha H16 chromosome 1, complete sequenceAcetyl/propionyl-CoA carboxylase,carboxyltransferase subunit9e-46185
NC_015422:1694363:1719573171957317211531581Alicycliphilus denitrificans K601 chromosome, complete genomemethylcrotonoyl-CoA carboxylase8e-46185
NC_013741:809030:8138368138368150651230Archaeoglobus profundus DSM 5631, complete genomecarboxyl transferase8e-46185
NC_008700:1627401:1650432165043216520391608Shewanella amazonensis SB2B, complete genomePropionyl-CoA carboxylase5e-45182
NC_009656:4079319:4079319407931940826063288Pseudomonas aeruginosa PA7 chromosome, complete genomebiotin carboxylase5e-44179
NC_014655:3345204:3347603334760333492041602Leadbetterella byssophila DSM 17132 chromosome, complete genomemethylcrotonoyl-CoA carboxylase2e-43177
NC_005296:2860000:2877195287719528788501656Rhodopseudomonas palustris CGA009, complete genomeputative acyl-CoA carboxylase, beta chain3e-43176
NC_004129:3452885:3491568349156834948403273Pseudomonas fluorescens Pf-5, complete genomebiotin carboxylase9e-43175
NC_007953:353496:3534963534963565973102Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative carbamoyl-phosphate synthase/carboxyltransferase4e-42173
NC_005085:24623:2462324623262271605Chromobacterium violaceum ATCC 12472, complete genomeprobable propionyl CoA carboxylase, beta subunit3e-42173
NC_014834:3130715:3130715313071531323191605Rhodopseudomonas palustris DX-1 chromosome, complete genomemethylcrotonoyl-CoA carboxylase4e-42172
NC_007958:396439:4143544143544159611608Rhodopseudomonas palustris BisB5, complete genomePropionyl-CoA carboxylase5e-42172
NC_015458:3390674:3403812340381234053711560Pusillimonas sp. T7-7 chromosome, complete genomepropionyl-CoA carboxylase, putative8e-42172
NC_002678:4859111:4861075486107548626581584Mesorhizobium loti MAFF303099, complete genomeacetyl/propionyl CoA carboxylase, beta subunit1e-41171
NC_008148:1711679:1728628172862817302351608Rubrobacter xylanophilus DSM 9941, complete genomePropionyl-CoA carboxylase4e-41169
NC_008702:3375027:3380677338067733822841608Azoarcus sp. BH72, complete genomeprobable carboxyltransferase subunit of acetyl-CoA carboxylase1e-40168
NC_015638:2588954:2588954258895425905821629Lacinutrix sp. 5H-3-7-4 chromosome, complete genomemethylcrotonoyl-CoA carboxylase8e-41168
NC_010611:3413333:3413333341333334149461614Acinetobacter baumannii ACICU, complete genomeAcetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)2e-36154
NC_013062:421779:4449734449734466011629Flavobacteriaceae bacterium 3519-10, complete genomeMethylcrotonyl-CoA carboxylase carboxyl transferase subunit4e-36153
NC_010410:480518:4987784987785003911614Acinetobacter baumannii AYE, complete genomeputative propionyl-CoA carboxylase2e-35150
NC_010397:2063561:2065600206560020672011602Mycobacterium abscessus chromosome Chromosome, complete sequenceProbable acetyl/propionyl-CoA carboxylase beta subunit AccD25e-30132
NC_016604:5228500:5252246525224652538471602Mycobacterium rhodesiae NBB3 chromosome, complete genomeacetyl-CoA carboxylase, carboxyl transferase subunit alpha5e-30132
NC_016947:2380500:2407243240724324088441602Mycobacterium intracellulare MOTT-02 chromosome, complete genomecarboxyl transferase1e-29131
NC_014120:88679:9568495684970511368Burkholderia sp. CCGE1002 plasmid pBC201, complete sequencecarboxyl transferase7e-28125
NC_010627:532407:5377825377825391371356Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencecarboxyl transferase6e-25115
NC_003454:822804:8297128297128314661755Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeGlutaconyl-CoA decarboxylase A subunit4e-1686.7
NC_007759:2097734:2098959209895921007311773Syntrophus aciditrophicus SB, complete genomeglutaconyl-CoA decarboxylase A subunit3e-1170.5
NC_018748:1916012:192029619202961921138843Emticicia oligotrophica DSM 17448 chromosome, complete genomeAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta9e-0755.5