Pre_GI: BLASTP Hits

Some Help

Query: NC_008268:7052202:7066161 Rhodococcus sp. RHA1, complete genome

Start: 7066161, End: 7066598, Length: 438

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017031:1420738:1436279143627914374541176Corynebacterium pseudotuberculosis P54B96 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-1892
NC_017303:1420758:1436300143630014374751176Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRossmann-fold nucleotide-binding protein/SMF1e-1892
NC_017301:1425293:1436222143622214373971176Corynebacterium pseudotuberculosis C231 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-1892
NC_017300:1426975:1433834143383414350091176Corynebacterium pseudotuberculosis 1002 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-1892
NC_014329:1407880:1436477143647714376521176Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-1892
NC_016781:1408235:1436415143641514375901176Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-1892
NC_016790:1480441:1490742149074214918931152Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein3e-1890.5
NC_002935:1534889:1534889153488915360401152Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein3e-1890.5
NC_016782:1520324:1523215152321515243661152Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein4e-1890.1
NC_016786:1519481:1523480152348015246311152Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein4e-1890.1
NC_016788:1509943:1518248151824815193991152Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein6e-1889.4
NC_016787:1509831:1514783151478315159341152Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein6e-1889.4
NC_008699:2418722:2419839241983924208881050Nocardioides sp. JS614, complete genomeDNA protecting protein DprA2e-1580.9
NC_010572:2216309:2217400221740022187161317Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA processing Smf-family protein2e-1477.8
NC_014643:1986440:2000796200079620022801485Rothia dentocariosa ATCC 17931 chromosome, complete genomeDNA protecting protein DprA3e-1477.4
NC_014815:1686409:168954816895481690285738Micromonospora sp. L5 chromosome, complete genome5e-1476.6
NC_013216:1219775:1239497123949712405971101Desulfotomaculum acetoxidans DSM 771, complete genomeDNA protecting protein DprA8e-1475.9
NC_015573:997629:1014479101447910155881110Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA protecting protein DprA2e-1374.7
NC_015565:1647554:1647554164755416486451092Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA protecting protein DprA1e-1272
NC_009749:289695:309012309012309818807Francisella tularensis subsp. holarctica FTA, complete genomeDNA protecting protein DprA8e-1269.3
NC_007880:290059:309372309372310109738Francisella tularensis subsp. holarctica, complete genome2e-1167.8
NC_006526:1202000:1218755121875512199121158Zymomonas mobilis subsp. mobilis ZM4, complete genomeDNA processing chain A3e-1167.4
NC_014377:1060000:1062283106228310633621080Thermosediminibacter oceani DSM 16646 chromosome, complete genomeDNA protecting protein DprA6e-1166.2
NC_013162:811763:8154028154028164961095Capnocytophaga ochracea DSM 7271, complete genomeDNA protecting protein DprA1e-1065.1
NC_008752:5213431:5229981522998152312071227Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA protecting protein DprA2e-1064.7
NC_014960:1735786:1790547179054717916591113Anaerolinea thermophila UNI-1, complete genomeputative DNA processing protein2e-1064.3
NC_018145:147759:1477591477591489161158Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeDNA protecting protein DprA3e-1063.5
NC_005957:3665657:367219936721993673068870Bacillus thuringiensis serovar konkukian str. 97-27, completenucleotide-binding protein, SMF family7e-1062.8
NC_014335:3589726:360138036013803602129750Bacillus cereus biovar anthracis str. CI chromosome, completenucleotide-binding protein, Smf family9e-1062.4
NC_014624:2297000:2320474232047423215801107Eubacterium limosum KIST612 chromosome, complete genomeDNA protecting protein DprA2e-0961.6
NC_003909:3606177:362592436259243626793870Bacillus cereus ATCC 10987, complete genomeDNA processing protein (smf family)2e-0961.2
NC_011969:3575988:358253135825313583400870Bacillus cereus Q1 chromosome, complete genomeDNA processing protein (smf family)2e-0960.8
NC_011658:3603009:363857136385713639440870Bacillus cereus AH187 chromosome, complete genomeDNA processing Smf protein2e-0960.8
NC_009495:2571732:2571732257173225728171086Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA protecting protein DprA3e-0960.5
NC_014314:576465:6619486619486630361089Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA protecting protein DprA3e-0960.5
NC_017294:758992:7621257621257632191095Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA protecting protein DprA4e-0960.1
NC_017208:3816753:385063538506353851504870Bacillus thuringiensis serovar chinensis CT-43 chromosome, completenucleotide-binding SMF protein5e-0960.1
NC_015138:5276857:5295164529516452963751212Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDNA protecting protein DprA5e-0959.7
NC_014171:3726054:373450037345003735369870Bacillus thuringiensis BMB171 chromosome, complete genomenucleotide-binding SMF protein6e-0959.7
NC_014721:434501:4426364426364437331098Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeDNA protecting protein dpra1e-0858.9
NC_011992:3615517:3632024363202436331841161Acidovorax ebreus TPSY, complete genomeDNA protecting protein DprA1e-0858.5
NC_015422:4822636:4840955484095548420941140Alicycliphilus denitrificans K601 chromosome, complete genomeDNA protecting protein DprA1e-0858.5
NC_006511:3364448:3382067338206733831911125Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-0858.5
NC_010120:2055803:2075239207523920764261188Neisseria meningitidis 053442, complete genomeDNA processing chain A2e-0858.2
NC_014328:1379437:1396457139645713975571101Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Smf protein2e-0857.8
NC_008577:44184:4418444184452001017Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA protecting protein DprA3e-0857.4
NC_014844:2056943:2061979206197920632981320Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeDNA protecting protein DprA3e-0857.4
NC_017516:123618:1249861249861261791194Neisseria meningitidis H44/76 chromosome, complete genomeputative DNA processing protein DprA4e-0857
NC_017501:121902:1232701232701244571188Neisseria meningitidis 8013, complete genomeSmf protein (DNA processing chain A)4e-0857
NC_017512:2116295:2135729213572921369161188Neisseria meningitidis WUE 2594, complete genomeSmf protein (DNA processing chain A)4e-0857
NC_016826:929259:931492931492932334843Streptococcus infantarius subsp. infantarius CJ18 chromosome,DprA/SMF protein, putative DNA processingfactor4e-0856.6
NC_010410:3719599:3740583374058337417131131Acinetobacter baumannii AYE, complete genomeputative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)5e-0856.6
NC_010611:208268:2082682082682093981131Acinetobacter baumannii ACICU, complete genomepredicted Rossmann fold nucleotide-binding protein5e-0856.6
NC_010408:79855:659065907543954Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1,putative DNA processing SMF-family protein5e-0856.6
NC_017513:115870:1172381172381184251188Neisseria meningitidis G2136 chromosome, complete genomeputative DNA processing protein DprA5e-0856.6
NC_014483:1973233:1995184199518419963711188Paenibacillus polymyxa E681 chromosome, complete genomeSmf protein7e-0856.2
NC_013016:2041890:2061326206132620625131188Neisseria meningitidis alpha14 chromosome, complete genomeDNA processing protein DprA1e-0755.5
NC_013939:1812259:1823583182358318247191137Deferribacter desulfuricans SSM1, complete genomeDNA processing protein A9e-0855.5
NC_021177:6127431:6142510614251061449032394Streptomyces fulvissimus DSM 40593, complete genomePutative recombinase2e-0754.7
NC_002695:4153394:4167448416744841685721125Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-0753.5
NC_010003:1360472:140726114072611408253993Petrotoga mobilis SJ95, complete genomeDNA protecting protein DprA4e-0753.5
CP002185:3627992:3645405364540536465291125Escherichia coli W, complete genomeDNA protecting protein DprA4e-0753.5
NC_015312:1265797:129858112985811299459879Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA protecting protein DprA1e-0652
NC_012471:1197534:119976711997671200612846Streptococcus equi subsp. equi 4047, complete genomeSMF family protein1e-0652