Pre_GI: BLASTP Hits

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Query: NC_008268:7052202:7061179 Rhodococcus sp. RHA1, complete genome

Start: 7061179, End: 7062006, Length: 828

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018581:3871000:387965938796593880486828Gordonia sp. KTR9 chromosome, complete genomephage capsid protein8e-115413
NC_017904:2724941:273461227346122735442831Mycobacterium sp. MOTT36Y chromosome, complete genomephage capsid protein2e-84312
NC_014215:492855:501875501875502762888Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Phage major capsid protein, HK97 family1e-29130
NC_016947:4500329:451490845149084515750843Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein1e-22107
NC_016948:419500:428333428333428785453Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein9e-21100
NC_016948:419500:430083430083430640558Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein7e-1994.4
NC_012522:4299287:431148043114804312319840Rhodococcus opacus B4, complete genomehypothetical protein4e-1168.6