Pre_GI: BLASTP Hits

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Query: NC_008268:7052202:7055865 Rhodococcus sp. RHA1, complete genome

Start: 7055865, End: 7057607, Length: 1743

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016948:419500:4334974334974348431347Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein8e-97355
NC_003888:4750489:4754366475436647560151650Streptomyces coelicolor A3(2), complete genomeintegrase2e-52207
NC_016947:4500329:4506220450622045077461527Mycobacterium intracellulare MOTT-02 chromosome, complete genomephague integrase7e-48192
NC_016887:1093609:1098705109870511003961692Nocardia cyriacigeorgica GUH-2, complete genomeputative phage Integrase2e-45184
NC_014659:3654979:3670491367049136723291839Rhodococcus equi 103S, complete genomephague integrase1e-44181
NC_017904:2724941:2741824274182427432421419Mycobacterium sp. MOTT36Y chromosome, complete genomephage Integrase3e-40167
NC_014210:618500:6252376252376267991563Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Resolvase domain protein5e-39162
NC_016109:785819:7951807951807968651686Kitasatospora setae KM-6054, complete genomehypothetical protein3e-33143
NC_003888:2814360:2823656282365628252121557Streptomyces coelicolor A3(2), complete genomeintegrase1e-32141
NC_003888:4031299:4038637403863740402801644Streptomyces coelicolor A3(2), complete genomehypothetical protein6e-30132
NC_018581:3871000:3874713387471338763081596Gordonia sp. KTR9 chromosome, complete genomeintegrase6e-21102
NC_016111:1766010:1771318177131817727361419Streptomyces cattleya NRRL 8057, complete genomeintegrase2e-20101
NC_013521:345308:3614883614883627681281Sanguibacter keddieii DSM 10542, complete genomesite-specific recombinase, DNA invertase Pin2e-20100
NC_017904:4742775:4779594477959447809251332Mycobacterium sp. MOTT36Y chromosome, complete genomerecombinase2e-1791.3
NC_009480:2580429:2587139258713925888421704Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative integrase/recombinase2e-1790.9
NC_016109:4753493:4761095476109547621621068Kitasatospora setae KM-6054, complete genomeputative recombinase2e-1584.7
NC_008595:3914463:3917497391749739189361440Mycobacterium avium 104, complete genomeintegrase/recombinase3e-1584
NC_013440:3813132:3838534383853438401111578Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein4e-1480.1
NC_014915:2963500:3002419300241930038071389Geobacillus sp. Y412MC52 chromosome, complete genomeResolvase domain protein1e-1379
NC_013411:597235:6001286001286015161389Geobacillus sp. Y412MC61, complete genomeResolvase domain protein1e-1379
NC_013757:1212308:1212308121230812136901383Geodermatophilus obscurus DSM 43160, complete genomeResolvase domain protein1e-1378.6
NC_014034:2899120:2911608291160829129331326Rhodobacter capsulatus SB1003 chromosome, complete genomeresolvase family protein2e-1377.8
NC_011898:3367457:3370767337076733723381572Clostridium cellulolyticum H10, complete genomeResolvase domain protein7e-1375.9
NC_014365:2888897:2900319290031929018781560Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein2e-1274.7
NC_017297:2531750:2570151257015125713741224Clostridium botulinum F str. 230613 chromosome, complete genome2e-1274.7
NC_016582:5393568:5409756540975654111441389Streptomyces bingchenggensis BCW-1 chromosome, complete genomerecombinase2e-1274.3
NC_008699:1132790:1150783115078311521801398Nocardioides sp. JS614, complete genomeRecombinase2e-1274.3
NC_011837:3272752:3294545329454532962001656Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1273.9
NC_007777:3000941:3014471301447130157091239Frankia sp. CcI3, complete genomeRecombinase3e-1273.9
NC_015660:739040:7405367405367419271392Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein4e-1273.6
NC_009699:2552195:2570011257001125715611551Clostridium botulinum F str. Langeland chromosome, complete genomeresolvase family protein4e-1273.6
NC_010981:314745:3593593593593606571299Wolbachia pipientis, complete genomesite-specific recombinase, resolvase family4e-1273.6
NC_008726:1533727:1537760153776015391631404Mycobacterium vanbaalenii PYR-1, complete genomeRecombinase5e-1273.2
NC_002978:618723:6266506266506281191470Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW5, site-specific recombinase, resolvase family5e-1273.2
NC_013440:1580802:1592997159299715946011605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein8e-1272.4
NC_013440:1131376:1154285115428511558891605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein1e-1172
NC_014365:2843126:2857047285704728586061560Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein1e-1172
NC_013440:1317982:1320107132010713217111605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein1e-1172
NC_012793:383612:3892203892203907161497Geobacillus sp. WCH70, complete genomeRecombinase3e-1170.5
NC_012563:2680246:2695798269579826973361539Clostridium botulinum A2 str. Kyoto, complete genomeresolvase family protein4e-1170.5
NC_015975:558523:5608265608265623941569Lactobacillus ruminis ATCC 27782 chromosome, complete genomeRecombinase/Resolvase5e-1170.1
NC_019673:8581000:8588980858898085905901611Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-1169.3
NC_014365:2037506:2051634205163420532201587Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein1e-1068.9
NC_004757:2730057:2780172278017227815271356Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase1e-1068.9
NC_008576:3307297:3314177331417733155141338Magnetococcus sp. MC-1, complete genomeResolvase, N-terminal domain9e-1168.9
NC_014538:2158131:2183214218321421847341521Thermoanaerobacter sp. X513 chromosome, complete genomeRecombinase9e-1168.9
NC_009454:136468:1560681560681575431476Pelotomaculum thermopropionicum SI, complete genomehypothetical protein1e-1068.6
NC_006582:2944237:2992454299245429938571404Bacillus clausii KSM-K16, complete genomesite-specific recombinase for integration and excision1e-1068.6
NC_014366:2826575:2833647283364728350021356Gamma proteobacterium HdN1, complete genomePredicted site-specific recombinase2e-1068.2
NC_009953:1364500:1375587137558713772631677Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein2e-1067.8
NC_011666:2109274:2112431211243121141161686Methylocella silvestris BL2, complete genomeResolvase domain protein2e-1067.8
NC_013729:5982000:5988854598885459902331380Kribbella flavida DSM 17836, complete genomeRecombinase2e-1067.8
NC_011837:2605409:2626952262695226285231572Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1067.4
NC_009706:2673906:2695449269544926970201572Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-1067.4
NC_013205:526281:5333245333245347511428Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Resolvase domain protein3e-1067.4
NC_010981:314745:3200063200063214871482Wolbachia pipientis, complete genomesite-specific recombinase, resolvase family3e-1067
NC_010981:425387:4447164447164462031488Wolbachia pipientis, complete genomesite-specific recombinase, resolvase family4e-1067
NC_008686:2080770:2081476208147620828011326Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRecombinase5e-1066.6
NC_010337:2793667:2815262281526228168361575Heliobacterium modesticaldum Ice1, complete genomeDNA recombinase, putative5e-1066.6
NC_015957:1070500:1070592107059210720371446Streptomyces violaceusniger Tu 4113 chromosome, complete genomeResolvase domain-containing protein7e-1066.2
NC_006510:887545:8999548999549014261473Geobacillus kaustophilus HTA426, complete genomesite-specific recombinase (resolvase family)7e-1066.2
NC_016023:2163000:2174239217423921752941056Bacillus coagulans 36D1 chromosome, complete genomerecombinase7e-1066.2
NC_010320:1268355:1311640131164013132111572Thermoanaerobacter sp. X514 chromosome, complete genomeresolvase domain-containing protein9e-1065.9
NC_014538:1598106:1601171160117116027421572Thermoanaerobacter sp. X513 chromosome, complete genomeResolvase domain-containing protein9e-1065.9
NC_014168:1963129:1980871198087119823011431Segniliparus rotundus DSM 44985 chromosome, complete genomeresolvase domain-containing protein1e-0965.5
NC_014311:198542:2098252098252112131389Ralstonia solanacearum PSI07 chromosome, complete genomesite-specific resolvase protein1e-0965.1
NC_015422:2078618:2093031209303120944101380Alicycliphilus denitrificans K601 chromosome, complete genomeresolvase domain-containing protein1e-0965.1
NC_014220:70490:8320483204849131710Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeResolvase domain protein2e-0964.7
NC_007645:6500059:6534682653468265362021521Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase3e-0963.9
NC_012416:573202:5811505811505826431494Wolbachia sp. wRi, complete genomesite-specific recombinase, resolvase family4e-0963.5
NC_012416:1079661:1087609108760910891021494Wolbachia sp. wRi, complete genomesite-specific recombinase, resolvase family4e-0963.5
NC_003295:3421520:3430395343039534317831389Ralstonia solanacearum GMI1000, complete genomePUTATIVE SITE-SPECIFIC INTEGRASE/RESOLVASE PROTEIN4e-0963.5
NC_014151:1373937:1381285138128513826881404Cellulomonas flavigena DSM 20109 chromosome, complete genomeResolvase domain protein4e-0963.5
NC_018870:2316499:2329010232901023305781569Thermacetogenium phaeum DSM 12270 chromosome, complete genomeresolvase6e-0963.2
NC_010943:1938136:1942507194250719438771371Stenotrophomonas maltophilia K279a, complete genomeputative recombinase/resolvase6e-0963.2
NC_015684:3340519:3345276334527633465831308Oligotropha carboxidovorans OM5 chromosome, complete genomesite-specific recombinases/DNA5e-0963.2
NC_011386:763111:7778747778747791811308Oligotropha carboxidovorans OM5, complete genomeresolvase5e-0963.2
NC_009256:3601080:3609737360973736111851449Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein8e-0962.8
NC_015278:176508:1910631910631922891227Aerococcus urinae ACS-120-V-Col10a chromosome, complete genome1e-0862.4
NC_003155:5443230:5457668545766854591011434Streptomyces avermitilis MA-4680, complete genomeintegrase/recombinase1e-0862
NC_014151:657382:6626926626926640771386Cellulomonas flavigena DSM 20109 chromosome, complete genomeResolvase domain protein1e-0862
NC_013722:2810721:2842626284262628440141389Xanthomonas albilineans, complete genomeputative site-specific integrase protein1e-0862
NC_016627:793583:7976187976187991341517Clostridium clariflavum DSM 19732 chromosome, complete genome1e-0862
NC_017082:532000:5446575446575458981242Bradyrhizobium sp. S23321, complete genomehypothetical protein1e-0861.6
NC_008347:174000:1810061810061826431638Maricaulis maris MCS10, complete genomeRecombinase2e-0861.6
NC_006270:4149004:4173904417390441751481245Bacillus licheniformis ATCC 14580, complete genomesite-specific DNA recombinase2e-0861.2
NC_006322:4149500:4174019417401941752631245Bacillus licheniformis ATCC 14580, complete genomeSpoIVCA2e-0861.2
NC_015977:2309873:2331366233136623330421677Roseburia hominis A2-183 chromosome, complete genomesite-specific recombinase2e-0861.2
NC_003295:921256:9375829375829389641383Ralstonia solanacearum GMI1000, complete genomePUTATIVE SITE-SPECIFIC INTEGRASE/RECOMBINASE PROTEIN2e-0861.2
NC_014538:1598106:1603166160316616047251560Thermoanaerobacter sp. X513 chromosome, complete genomeResolvase domain-containing protein3e-0860.8
NC_012490:2067246:2073458207345820748131356Rhodococcus erythropolis PR4, complete genomerecombinase3e-0860.8
NC_010320:1268355:1309657130965713112161560Thermoanaerobacter sp. X514 chromosome, complete genomeresolvase domain-containing protein3e-0860.8
NC_015278:176508:1893931893931910631671Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomeresolvase, N-terminal domain protein3e-0860.8
NC_007645:5801295:5813910581391058152651356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase2e-0860.8
NC_016026:1969766:1975530197553019771401611Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeresolvase, N terminal domain-containing protein3e-0860.5
NC_020387:1257163:1279079127907912807341656Dehalococcoides mccartyi BTF08, complete genomesite-specific recombinase, resolvase family5e-0860.1
NC_017179:2067015:2067015206701520686131599Clostridium difficile BI1, complete genomesite-specific recombinases6e-0859.7
NC_013315:2059007:2059007205900720606051599Clostridium difficile CD196 chromosome, complete genomesite-specific recombinases6e-0859.7
NC_013165:2240377:2265193226519322668121620Slackia heliotrinireducens DSM 20476, complete genomesite-specific recombinase, DNA invertase Pin6e-0859.7
NC_014209:1487699:1500183150018315018891707Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Resolvase domain protein8e-0859.3
NC_014910:1912552:1921502192150219228811380Alicycliphilus denitrificans BC chromosome, complete genomeresolvase domain protein7e-0859.3
NC_007645:5724000:5743484574348457448391356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase7e-0859.3
NC_011891:4169796:4176886417688641779111026Anaeromyxobacter dehalogenans 2CP-1, complete genomeResolvase domain protein9e-0858.9
NC_014624:2668157:2710067271006727116891623Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0758.9
NC_008095:2212644:2212644221264422141911548Myxococcus xanthus DK 1622, complete genomesite-specific recombinase, resolvase family2e-0757.8
NC_013768:1802313:1812474181247418140751602Listeria monocytogenes 08-5923, complete genomesite-specific DNA recombinase2e-0757.8
NC_013766:1835964:1845743184574318473441602Listeria monocytogenes 08-5578 chromosome, complete genomesite-specific DNA recombinase2e-0757.8
NC_014220:1162948:1171001117100111727071707Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeResolvase domain protein6e-0756.2
NC_016791:3891272:3907637390763739092921656Clostridium sp. BNL1100 chromosome, complete genomesite-specific recombinase, DNA invertase Pin2e-0655.1
NC_014824:366000:3735073735073752221716Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceResolvase domain2e-0654.7
NC_013169:805124:8088908088908104791590Kytococcus sedentarius DSM 20547, complete genomesite-specific recombinase, DNA invertase Pin3e-0654.3
NC_010172:2722000:273599827359982736843846Methylobacterium extorquens PA1, complete genomeResolvase domain4e-0653.5
NC_016791:3953972:3964053396405339656841632Clostridium sp. BNL1100 chromosome, complete genomesite-specific recombinase, DNA invertase Pin5e-0653.5
NC_015660:3174424:3174424317442431759981575Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein5e-0653.1
NC_013890:103807:1038071038071052641458Dehalococcoides sp. GT chromosome, complete genome8e-0652.8
NC_014623:3029853:3028327302832730298561530Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesite-specific recombinase9e-0652.4