Pre_GI: BLASTP Hits

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Query: NC_008268:7052202:7053285 Rhodococcus sp. RHA1, complete genome

Start: 7053285, End: 7053641, Length: 357

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012490:2660089:266732426673242667695372Rhodococcus erythropolis PR4, complete genomehypothetical protein7e-43172
NC_009953:1364500:137727913772791377638360Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein7e-25112
NC_014815:1686409:170499017049901705442453Micromonospora sp. L5 chromosome, complete genomehypothetical protein1e-23108
NC_010572:2216309:222953622295362229895360Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein7e-22102
NC_011661:1542335:154384515438451544201357Dictyoglomus turgidum DSM 6724, complete genomeprotein of unknown function UPF01022e-21100
NC_013730:7118798:711963771196377119990354Spirosoma linguale DSM 74, complete genomeprotein of unknown function UPF01021e-2098.2
NC_011297:1357947:135945713594571359813357Dictyoglomus thermophilum H-6-12, complete genomehypothetical protein7e-2095.9
NC_014652:1758787:178076617807661781125360Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein6e-2095.9
NC_010520:2635750:263728926372892637660372Clostridium botulinum A3 str. Loch Maree, complete genomeconserved hypothetical protein TIGR002521e-1995.1
NC_003888:6103534:610447661044766104868393Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-1993.6
NC_014328:1379437:139406113940611394429369Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein7e-1992.4
NC_009495:2571732:257455625745562574927372Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein2e-1891.3
NC_013216:1219775:123529312352931235652360Desulfotomaculum acetoxidans DSM 771, complete genomeprotein of unknown function UPF01023e-1787
NC_010424:697187:698542698542698892351Candidatus Desulforudis audaxviator MP104C, complete genomeprotein of unknown function UPF01027e-1785.9
NC_020291:1437431:145179214517921452160369Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeendonuclease1e-1685.1
NC_018515:3865522:386972138697213870074354Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein8e-1682.4
NC_014624:2668157:266815726681572668528372Eubacterium limosum KIST612 chromosome, complete genomeendonuclease9e-1682
NC_014483:1973233:198825819882581988641384Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein1e-1582
NC_014654:1529500:152992315299231530288366Halanaerobium sp. 'sapolanicus' chromosome, complete genomeUncharacterized protein family UPF01023e-1580.9
NC_012781:2148478:215300521530052153373369Eubacterium rectale ATCC 33656, complete genomehypothetical protein2e-1580.9
NC_016584:4860360:486481948648194865181363Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein6e-1579.3
NC_016109:5768000:577544157754415775911471Kitasatospora setae KM-6054, complete genomehypothetical protein7e-1579
NC_012997:4026000:405623140562314056620390Teredinibacter turnerae T7901, complete genomehypothetical protein4e-1477
NC_015732:529201:530992530992531348357Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein4e-1476.6
NC_015740:1017000:103845310384531038815363Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein4e-1476.6
NC_005085:659378:684228684228684566339Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-1476.3
NC_021150:1258780:127518112751811275543363Azotobacter vinelandii CA6, complete genomehypothetical protein8e-1475.5
NC_012560:1260031:127516912751691275531363Azotobacter vinelandii DJ, complete genomehypothetical protein8e-1475.5
NC_007645:6013242:601834260183426018716375Hahella chejuensis KCTC 2396, complete genomepredicted endonuclease distantly related to archaeal Holliday junction resolvase3e-1373.9
NC_017047:4379989:440058644005864400954369Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein6e-1372.8
NC_015061:4286000:430670043067004307068369Rahnella sp. Y9602 chromosome, complete genomeUncharacterized protein family UPF01026e-1372.8
NC_009614:2431005:245405824540582454423366Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein6e-1372.8
NC_016782:1520324:152590015259001526427528Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein4e-1167
NC_016786:1519481:152616515261651526692528Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein4e-1167
NC_016790:1480441:149342714934271493954528Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein4e-1167
NC_016787:1509831:151746815174681517995528Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein4e-1167
NC_016788:1509943:152093315209331521460528Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein4e-1167
NC_002935:1534889:153757415375741538101528Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein3e-1167
NC_014643:1986440:199883919988391999201363Rothia dentocariosa ATCC 17931 chromosome, complete genomeendonuclease2e-1064.7
NC_011059:1:195611956119944384Prosthecochloris aestuarii DSM 271, complete genomeprotein of unknown function UPF01022e-1064.7
NC_006350:3865584:389019738901973890631435Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-0857
NC_011000:183928:185552185552185980429Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-0754.3
NC_007651:3560652:359152635915263592008483Burkholderia thailandensis E264 chromosome I, complete sequenceconserved hypothetical protein TIGR002523e-0754.3
NC_014926:1483974:150572715057271505972246Thermovibrio ammonificans HB-1 chromosome, complete genome3e-0753.9
NC_013204:1135397:114234911423491142717369Eggerthella lenta DSM 2243, complete genomeprotein of unknown function UPF01021e-0652.4
NC_014836:2919508:292359229235922923900309Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein2e-0651.6
NC_008782:401667:421441421441421839399Acidovorax sp. JS42, complete genomeprotein of unknown function UPF01021e-0651.6
NC_008390:235155:236800236800237228429Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function UPF01022e-0651.2
NC_016781:1408235:1437587143758714395211935Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeATP-dependent protease5e-0649.7
NC_014329:1407880:1437649143764914395831935Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein5e-0649.7
NC_011992:392534:412287412287412685399Acidovorax ebreus TPSY, complete genomeprotein of unknown function UPF01026e-0649.7