Pre_GI: BLASTP Hits

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Query: NC_008268:6149576:6158947 Rhodococcus sp. RHA1, complete genome

Start: 6158947, End: 6159564, Length: 618

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:5987644:600688860068886007445558Rhodococcus opacus B4, complete genomehypothetical protein6e-25114
NC_010407:2406113:241089924108992411483585Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein2e-2099
NC_014814:4235477:423824242382424238808567Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein3e-1995.1
NC_018531:3625810:363023836302383630786549Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein2e-1685.9
NC_015859:370500:380945380945381514570Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein1e-1583.2
NC_008711:3454359:345879934587993459347549Arthrobacter aurescens TC1, complete genomeputative uncharacterized DUF218 domain protein2e-1582.4
NC_015859:370500:375976375976376548573Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein7e-1477